RNA–Protein interactions for RNA: ENSMUST00000003203.13

Cdk12-201, Transcript of Cyclin-dependent kinase 12, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cdk12, Length 4,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk12-201ENSMUST00000003203 Rhox8Q6VSS7 320 aa17.09■□□□□ 0.33
Cdk12-201ENSMUST00000003203 NischQ80TM9 1593 aa16.68■□□□□ 0.26
Cdk12-201ENSMUST00000003203 Gm35339A0A140LHH9 1649 aa16.52■□□□□ 0.24
Cdk12-201ENSMUST00000003203 Abcc9P70170 1546 aa16.09■□□□□ 0.17
Cdk12-201ENSMUST00000003203 Abcc8B2RUS7 1588 aa15.84■□□□□ 0.13
Cdk12-201ENSMUST00000003203 Rpgrip1Q9EPQ2 1331 aa15.67■□□□□ 0.1
Cdk12-201ENSMUST00000003203 Ehmt2Q9Z148 1263 aaKnown RBP15.5■□□□□ 0.07
Cdk12-201ENSMUST00000003203 Dcaf1Q80TR8 1506 aa15.14■□□□□ 0.01
Cdk12-201ENSMUST00000003203 Ccdc136Q3TVA9 1136 aa15.13■□□□□ 0.01
Cdk12-201ENSMUST00000003203 Cngb1E1AZ71 1325 aa15.1■□□□□ 0.01
Cdk12-201ENSMUST00000003203 Las1lA2BE28 776 aaKnown RBP15.1■□□□□ 0.01
Cdk12-201ENSMUST00000003203 Wdr66E9Q743 1299 aa15.05■□□□□ 0
Cdk12-201ENSMUST00000003203 NacadQ5SWP3 1504 aa15.03■□□□□ -0
Cdk12-201ENSMUST00000003203 Esf1Q3V1V3 845 aaKnown RBP14.96□□□□□ -0.01
Cdk12-201ENSMUST00000003203 Zeb1Q64318 1117 aa14.92□□□□□ -0.02
Cdk12-201ENSMUST00000003203 Gab3Q8BSM5 595 aa14.89□□□□□ -0.03
Cdk12-201ENSMUST00000003203 Ube2uB1AUC4 352 aa14.84□□□□□ -0.03
Cdk12-201ENSMUST00000003203 Rtl1Q7M732 1744 aa14.83□□□□□ -0.04
Cdk12-201ENSMUST00000003203 Pelp1Q9DBD5 1123 aaKnown RBP14.75□□□□□ -0.05
Cdk12-201ENSMUST00000003203 Trim41Q5NCC3 630 aa14.74□□□□□ -0.05
Cdk12-201ENSMUST00000003203 Ccdc180J3QNE4 1664 aa14.72□□□□□ -0.05
Cdk12-201ENSMUST00000003203 Npm2Q80W85 207 aa14.68□□□□□ -0.06
Cdk12-201ENSMUST00000003203 Myt1lP97500 1187 aa14.62□□□□□ -0.07
Cdk12-201ENSMUST00000003203 ScribQ80U72 1612 aa14.61□□□□□ -0.07
Cdk12-201ENSMUST00000003203 Kdm5dQ62240 1548 aa14.61□□□□□ -0.07
Cdk12-201ENSMUST00000003203 Crybg2B7ZCC2 1516 aa14.6□□□□□ -0.07
Cdk12-201ENSMUST00000003203 Rb1cc1Q9ESK9 1588 aa14.6□□□□□ -0.07
Cdk12-201ENSMUST00000003203 Baz1aO88379 1555 aa14.51□□□□□ -0.09
Cdk12-201ENSMUST00000003203 Acin1Q9JIX8 1338 aaKnown RBP14.5□□□□□ -0.09
Cdk12-201ENSMUST00000003203 Sycp2Q9CUU3 1500 aa14.48□□□□□ -0.09
Cdk12-201ENSMUST00000003203 CenpbP27790 599 aa14.41□□□□□ -0.1
Cdk12-201ENSMUST00000003203 NefmP08553 848 aa14.39□□□□□ -0.11
Cdk12-201ENSMUST00000003203 UbtfP25976 765 aaKnown RBP14.38□□□□□ -0.11
Cdk12-201ENSMUST00000003203 Zcchc6Q5BLK4 1491 aaKnown RBP14.34□□□□□ -0.11
Cdk12-201ENSMUST00000003203 Amer1Q7TS75 1132 aa14.26□□□□□ -0.13
Cdk12-201ENSMUST00000003203 Pds5bQ4VA53 1446 aaKnown RBP14.25□□□□□ -0.13
Cdk12-201ENSMUST00000003203 Slc24a1Q91WD8 1130 aa14.24□□□□□ -0.13
Cdk12-201ENSMUST00000003203 Stra8P70278 393 aa14.24□□□□□ -0.13
Cdk12-201ENSMUST00000003203 Brd4Q9ESU6 1400 aaKnown RBP14.17□□□□□ -0.14
Cdk12-201ENSMUST00000003203 HrcG5E8J6 738 aa14.11□□□□□ -0.15
Cdk12-201ENSMUST00000003203 Smarca2Q6DIC0 1577 aa14.1□□□□□ -0.15
Cdk12-201ENSMUST00000003203 Cdk11bP24788 784 aaKnown RBP14.1□□□□□ -0.15
Cdk12-201ENSMUST00000003203 Ercc6F8VPZ5 1481 aa14.09□□□□□ -0.15
Cdk12-201ENSMUST00000003203 Pcgf6Q99NA9 353 aa14.08□□□□□ -0.16
Cdk12-201ENSMUST00000003203 Baz1bQ9Z277 1479 aa14.06□□□□□ -0.16
Cdk12-201ENSMUST00000003203 Il27Q8K3I6 234 aa14.03□□□□□ -0.16
Cdk12-201ENSMUST00000003203 Atad2bE9Q166 1460 aaKnown RBP13.97□□□□□ -0.17
Cdk12-201ENSMUST00000003203 Nop58Q6DFW4 536 aaKnown RBP13.94□□□□□ -0.18
Cdk12-201ENSMUST00000003203 Fam50aQ9WV03 339 aaKnown RBP13.92□□□□□ -0.18
Cdk12-201ENSMUST00000003203 Ttbk1Q6PCN3 1308 aa13.91□□□□□ -0.18
Cdk12-201ENSMUST00000003203 Ppargc1bQ8VHJ7 1014 aa13.9□□□□□ -0.18
Cdk12-201ENSMUST00000003203 NrdcQ8BHG1 1161 aa13.89□□□□□ -0.19
Cdk12-201ENSMUST00000003203 NclP09405 707 aaKnown RBP13.88□□□□□ -0.19
Cdk12-201ENSMUST00000003203 Neurod1Q60867 357 aa13.87□□□□□ -0.19
Cdk12-201ENSMUST00000003203 Smarca4Q3TKT4 1613 aaKnown RBP13.86□□□□□ -0.19
Cdk12-201ENSMUST00000003203 Ap3b1Q9Z1T1 1105 aa13.86□□□□□ -0.19
Cdk12-201ENSMUST00000003203 Tnnt3Q9QZ47 272 aa13.85□□□□□ -0.19
Cdk12-201ENSMUST00000003203 Anp32bQ9EST5 272 aaKnown RBP13.83□□□□□ -0.19
Cdk12-201ENSMUST00000003203 Supt5hO55201 1082 aaKnown RBP13.82□□□□□ -0.2
Cdk12-201ENSMUST00000003203 Eif5bQ05D44 1216 aaKnown RBP13.79□□□□□ -0.2
Cdk12-201ENSMUST00000003203 4933416C03RikQ3V063 378 aa13.79□□□□□ -0.2
Cdk12-201ENSMUST00000003203 Myt1Q8CFC2 1127 aa13.78□□□□□ -0.2
Cdk12-201ENSMUST00000003203 NeflP08551 543 aa13.76□□□□□ -0.21
Cdk12-201ENSMUST00000003203 TonslQ6NZL6 1363 aa13.73□□□□□ -0.21
Cdk12-201ENSMUST00000003203 BicraF8VPZ9 1578 aa13.72□□□□□ -0.21
Cdk12-201ENSMUST00000003203 Cttnbp2B9EJA2 1648 aa13.69□□□□□ -0.22
Cdk12-201ENSMUST00000003203 4930567H17RikQ3V0K5 233 aa13.69□□□□□ -0.22
Cdk12-201ENSMUST00000003203 Os9Q8K2C7 672 aa13.68□□□□□ -0.22
Cdk12-201ENSMUST00000003203 Mier1Q5UAK0 511 aa13.65□□□□□ -0.22
Cdk12-201ENSMUST00000003203 Phldb1Q6PDH0 1371 aaKnown RBP13.64□□□□□ -0.23
Cdk12-201ENSMUST00000003203 Rsf1E9PWW9 1441 aaKnown RBP13.64□□□□□ -0.23
Cdk12-201ENSMUST00000003203 Iqgap2Q3UQ44 1575 aa13.63□□□□□ -0.23
Cdk12-201ENSMUST00000003203 CftrP26361 1476 aa13.55□□□□□ -0.24
Cdk12-201ENSMUST00000003203 Golga3P55937 1487 aa13.53□□□□□ -0.24
Cdk12-201ENSMUST00000003203 Npm1Q61937 292 aaKnown RBP13.53□□□□□ -0.24
Cdk12-201ENSMUST00000003203 Ubl4bQ9CQ84 188 aa13.5□□□□□ -0.25
Cdk12-201ENSMUST00000003203 Ccdc18Q640L5 1455 aa13.5□□□□□ -0.25
Cdk12-201ENSMUST00000003203 Lmod2Q3UHZ5 550 aa13.49□□□□□ -0.25
Cdk12-201ENSMUST00000003203 Plekhg3Q4VAC9 1341 aa13.48□□□□□ -0.25
Cdk12-201ENSMUST00000003203 Rtl5Q5DTT4 599 aa13.47□□□□□ -0.25
Cdk12-201ENSMUST00000003203 ClspnQ80YR7 1315 aa13.47□□□□□ -0.25
Cdk12-201ENSMUST00000003203 Cep164Q5DU05 1446 aa13.46□□□□□ -0.25
Cdk12-201ENSMUST00000003203 Zbtb7cQ8VCZ7 619 aa13.45□□□□□ -0.26
Cdk12-201ENSMUST00000003203 Wdr62Q3U3T8 1523 aa13.41□□□□□ -0.26
Cdk12-201ENSMUST00000003203 Fmn1Q05860 1466 aa13.4□□□□□ -0.26
Cdk12-201ENSMUST00000003203 Synj1Q8CHC4 1574 aa13.38□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Cecr2E9Q2Z1 1453 aa13.38□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Anp32aO35381 247 aa13.37□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Hnrnpul2Q00PI9 745 aaKnown RBP13.36□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Mapk8ip2Q9ERE9 830 aa13.36□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Kif15Q6P9L6 1387 aa13.35□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Chic1Q8CBW7 227 aa13.35□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Fam135aQ6NS59 1506 aa13.35□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Eid3Q3V124 375 aa13.34□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Thoc2B1AZI6 1594 aaKnown RBP13.34□□□□□ -0.27
Cdk12-201ENSMUST00000003203 Zbtb4Q5F293 982 aa13.33□□□□□ -0.28
Cdk12-201ENSMUST00000003203 DaxxO35613 739 aa13.32□□□□□ -0.28
Cdk12-201ENSMUST00000003203 Sall2Q9QX96 1004 aa13.29□□□□□ -0.28
Cdk12-201ENSMUST00000003203 Frmpd1A2AKB4 1549 aa13.28□□□□□ -0.28
Cdk12-201ENSMUST00000003203 Gm38655A0A286YDK6 273 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms