RNA–Protein interactions for RNA: ENSMUST00000001043.13

Chtop-201, Transcript of Chromatin target of PRMT1 protein, mousemouse

TSL 1 (best) BASIC

Gene Chtop, Length 3,257 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chtop-201ENSMUST00000001043 NischQ80TM9 1593 aa22.66■■□□□ 1.22
Chtop-201ENSMUST00000001043 Gm35339A0A140LHH9 1649 aa22.12■■□□□ 1.13
Chtop-201ENSMUST00000001043 Abcc9P70170 1546 aa21.95■■□□□ 1.11
Chtop-201ENSMUST00000001043 Abcc8B2RUS7 1588 aa21.5■■□□□ 1.03
Chtop-201ENSMUST00000001043 Rhox8Q6VSS7 320 aa21.2■□□□□ 0.98
Chtop-201ENSMUST00000001043 Rtl1Q7M732 1744 aa20.52■□□□□ 0.88
Chtop-201ENSMUST00000001043 Ccdc180J3QNE4 1664 aa20.24■□□□□ 0.83
Chtop-201ENSMUST00000001043 ScribQ80U72 1612 aa20.08■□□□□ 0.8
Chtop-201ENSMUST00000001043 Zcchc6Q5BLK4 1491 aaKnown RBP19.99■□□□□ 0.79
Chtop-201ENSMUST00000001043 Ehmt2Q9Z148 1263 aaKnown RBP19.96■□□□□ 0.79
Chtop-201ENSMUST00000001043 Dcaf1Q80TR8 1506 aa19.91■□□□□ 0.78
Chtop-201ENSMUST00000001043 Rb1cc1Q9ESK9 1588 aa19.85■□□□□ 0.77
Chtop-201ENSMUST00000001043 Ccdc136Q3TVA9 1136 aa19.73■□□□□ 0.75
Chtop-201ENSMUST00000001043 Kdm5dQ62240 1548 aa19.7■□□□□ 0.74
Chtop-201ENSMUST00000001043 Baz1aO88379 1555 aa19.58■□□□□ 0.73
Chtop-201ENSMUST00000001043 Rpgrip1Q9EPQ2 1331 aa19.58■□□□□ 0.72
Chtop-201ENSMUST00000001043 NacadQ5SWP3 1504 aa19.47■□□□□ 0.71
Chtop-201ENSMUST00000001043 HrcG5E8J6 738 aa19.38■□□□□ 0.69
Chtop-201ENSMUST00000001043 Acin1Q9JIX8 1338 aaKnown RBP19.35■□□□□ 0.69
Chtop-201ENSMUST00000001043 Trim41Q5NCC3 630 aa19.17■□□□□ 0.66
Chtop-201ENSMUST00000001043 Smarca2Q6DIC0 1577 aa19.15■□□□□ 0.66
Chtop-201ENSMUST00000001043 Crybg2B7ZCC2 1516 aa19.12■□□□□ 0.65
Chtop-201ENSMUST00000001043 Sycp2Q9CUU3 1500 aa19.08■□□□□ 0.64
Chtop-201ENSMUST00000001043 Pcgf6Q99NA9 353 aa18.98■□□□□ 0.63
Chtop-201ENSMUST00000001043 Cecr2E9Q2Z1 1453 aa18.83■□□□□ 0.6
Chtop-201ENSMUST00000001043 Cngb1E1AZ71 1325 aa18.81■□□□□ 0.6
Chtop-201ENSMUST00000001043 Cep164Q5DU05 1446 aa18.8■□□□□ 0.6
Chtop-201ENSMUST00000001043 Chic1Q8CBW7 227 aa18.76■□□□□ 0.59
Chtop-201ENSMUST00000001043 Gab3Q8BSM5 595 aa18.72■□□□□ 0.59
Chtop-201ENSMUST00000001043 BicraF8VPZ9 1578 aa18.71■□□□□ 0.59
Chtop-201ENSMUST00000001043 Supt5hO55201 1082 aaKnown RBP18.69■□□□□ 0.58
Chtop-201ENSMUST00000001043 Rsf1E9PWW9 1441 aaKnown RBP18.69■□□□□ 0.58
Chtop-201ENSMUST00000001043 Brd4Q9ESU6 1400 aaKnown RBP18.69■□□□□ 0.58
Chtop-201ENSMUST00000001043 Zeb1Q64318 1117 aa18.62■□□□□ 0.57
Chtop-201ENSMUST00000001043 Synj1Q8CHC4 1574 aa18.61■□□□□ 0.57
Chtop-201ENSMUST00000001043 Ccdc88bQ4QRL3 1481 aa18.58■□□□□ 0.57
Chtop-201ENSMUST00000001043 Golga3P55937 1487 aa18.54■□□□□ 0.56
Chtop-201ENSMUST00000001043 Esf1Q3V1V3 845 aaKnown RBP18.51■□□□□ 0.55
Chtop-201ENSMUST00000001043 CftrP26361 1476 aa18.47■□□□□ 0.55
Chtop-201ENSMUST00000001043 Top2bQ64511 1612 aa18.29■□□□□ 0.52
Chtop-201ENSMUST00000001043 Neurod1Q60867 357 aa18.29■□□□□ 0.52
Chtop-201ENSMUST00000001043 Cttnbp2B9EJA2 1648 aa18.29■□□□□ 0.52
Chtop-201ENSMUST00000001043 Smarca4Q3TKT4 1613 aaKnown RBP18.25■□□□□ 0.51
Chtop-201ENSMUST00000001043 Cc2d2aQ8CFW7 1633 aa18.2■□□□□ 0.5
Chtop-201ENSMUST00000001043 Mier1Q5UAK0 511 aa18.2■□□□□ 0.5
Chtop-201ENSMUST00000001043 Ppargc1bQ8VHJ7 1014 aa18.11■□□□□ 0.49
Chtop-201ENSMUST00000001043 Wdr66E9Q743 1299 aa18.09■□□□□ 0.49
Chtop-201ENSMUST00000001043 UbtfP25976 765 aaKnown RBP18.08■□□□□ 0.48
Chtop-201ENSMUST00000001043 Sall2Q9QX96 1004 aa18.08■□□□□ 0.48
Chtop-201ENSMUST00000001043 NefmP08553 848 aa18.03■□□□□ 0.48
Chtop-201ENSMUST00000001043 Iqgap2Q3UQ44 1575 aa18.02■□□□□ 0.48
Chtop-201ENSMUST00000001043 Fmn1Q05860 1466 aa18.01■□□□□ 0.47
Chtop-201ENSMUST00000001043 Rapgef2Q8CHG7 1496 aa17.98■□□□□ 0.47
Chtop-201ENSMUST00000001043 Myt1lP97500 1187 aa17.96■□□□□ 0.46
Chtop-201ENSMUST00000001043 Top2aQ01320 1528 aaKnown RBP17.95■□□□□ 0.46
Chtop-201ENSMUST00000001043 Atad2bE9Q166 1460 aaKnown RBP17.9■□□□□ 0.46
Chtop-201ENSMUST00000001043 Cep162Q6ZQ06 1403 aa17.87■□□□□ 0.45
Chtop-201ENSMUST00000001043 Npm2Q80W85 207 aa17.85■□□□□ 0.45
Chtop-201ENSMUST00000001043 Las1lA2BE28 776 aaKnown RBP17.83■□□□□ 0.44
Chtop-201ENSMUST00000001043 Aebp2Q9Z248 504 aaKnown RBP17.8■□□□□ 0.44
Chtop-201ENSMUST00000001043 Pds5bQ4VA53 1446 aaKnown RBP17.78■□□□□ 0.44
Chtop-201ENSMUST00000001043 Csrnp3P59055 597 aa17.78■□□□□ 0.44
Chtop-201ENSMUST00000001043 Frmpd1A2AKB4 1549 aa17.71■□□□□ 0.43
Chtop-201ENSMUST00000001043 Thoc2B1AZI6 1594 aaKnown RBP17.7■□□□□ 0.42
Chtop-201ENSMUST00000001043 Il27Q8K3I6 234 aa17.69■□□□□ 0.42
Chtop-201ENSMUST00000001043 Plekhg3Q4VAC9 1341 aa17.67■□□□□ 0.42
Chtop-201ENSMUST00000001043 TnnQ80Z71 1560 aa17.67■□□□□ 0.42
Chtop-201ENSMUST00000001043 Gm38655A0A286YDK6 273 aa17.66■□□□□ 0.42
Chtop-201ENSMUST00000001043 Clip1Q922J3 1391 aa17.65■□□□□ 0.42
Chtop-201ENSMUST00000001043 1700123L14RikQ3V2K7 440 aa17.64■□□□□ 0.42
Chtop-201ENSMUST00000001043 Eif4g1Q6NZJ6 1600 aaKnown RBP17.64■□□□□ 0.41
Chtop-201ENSMUST00000001043 Wdr62Q3U3T8 1523 aa17.64■□□□□ 0.41
Chtop-201ENSMUST00000001043 PtprkP35822 1457 aa17.63■□□□□ 0.41
Chtop-201ENSMUST00000001043 Nop58Q6DFW4 536 aaKnown RBP17.62■□□□□ 0.41
Chtop-201ENSMUST00000001043 Cdk11bP24788 784 aaKnown RBP17.61■□□□□ 0.41
Chtop-201ENSMUST00000001043 Anks4bQ8K3X6 423 aa17.59■□□□□ 0.41
Chtop-201ENSMUST00000001043 Kif15Q6P9L6 1387 aa17.58■□□□□ 0.4
Chtop-201ENSMUST00000001043 Arhgap35Q91YM2 1499 aa17.56■□□□□ 0.4
Chtop-201ENSMUST00000001043 Lamc3Q9R0B6 1581 aa17.54■□□□□ 0.4
Chtop-201ENSMUST00000001043 Ap3b1Q9Z1T1 1105 aa17.52■□□□□ 0.4
Chtop-201ENSMUST00000001043 Myt1Q8CFC2 1127 aa17.52■□□□□ 0.4
Chtop-201ENSMUST00000001043 Dnajc5bQ9CQ94 199 aa17.52■□□□□ 0.39
Chtop-201ENSMUST00000001043 Unc13aQ4KUS2 1712 aa17.51■□□□□ 0.39
Chtop-201ENSMUST00000001043 Ercc6F8VPZ5 1481 aa17.48■□□□□ 0.39
Chtop-201ENSMUST00000001043 NrkQ9R0G8 1455 aa17.48■□□□□ 0.39
Chtop-201ENSMUST00000001043 DiexfQ8BTT6 772 aaKnown RBP17.47■□□□□ 0.39
Chtop-201ENSMUST00000001043 ClspnQ80YR7 1315 aa17.47■□□□□ 0.39
Chtop-201ENSMUST00000001043 TonslQ6NZL6 1363 aa17.47■□□□□ 0.39
Chtop-201ENSMUST00000001043 Camsap1A2AHC3 1581 aa17.43■□□□□ 0.38
Chtop-201ENSMUST00000001043 Arap1Q4LDD4 1452 aa17.43■□□□□ 0.38
Chtop-201ENSMUST00000001043 Eid3Q3V124 375 aa17.43■□□□□ 0.38
Chtop-201ENSMUST00000001043 Shroom4Q1W617 1475 aa17.42■□□□□ 0.38
Chtop-201ENSMUST00000001043 Eea1Q8BL66 1411 aa17.4■□□□□ 0.38
Chtop-201ENSMUST00000001043 Ncapd3Q6ZQK0 1506 aa17.39■□□□□ 0.38
Chtop-201ENSMUST00000001043 Setd5Q5XJV7 1441 aa17.38■□□□□ 0.37
Chtop-201ENSMUST00000001043 Mapk8ip2Q9ERE9 830 aa17.38■□□□□ 0.37
Chtop-201ENSMUST00000001043 CenpbP27790 599 aa17.36■□□□□ 0.37
Chtop-201ENSMUST00000001043 Baz1bQ9Z277 1479 aa17.35■□□□□ 0.37
Chtop-201ENSMUST00000001043 Grin2bQ01097 1482 aa17.34■□□□□ 0.37
Chtop-201ENSMUST00000001043 Ccdc18Q640L5 1455 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms