RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 NPPAP01160 153 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 JUNP05412 331 aaKnown RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 SNRPB2P08579 225 aaKnown RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 SLC35G4P0C7Q5 338 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 GNAZP19086 355 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 HNRNPA2B1P22626 353 aaKnown RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PRPH2P23942 346 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 ACADLP28330 430 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 NDUFS1P28331 727 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PBLDP30039 288 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 AKT2P31751 481 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 CASP2P42575 452 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 CCR5P51681 352 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 CLCNKAP51800 687 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 ABRQ12979 859 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 CSTF3Q12996 717 aaKnown RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 CUL3Q13618 768 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 LRP8Q14114 963 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 E2F2Q14209 437 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 INPP5AQ14642 412 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 MMEL1Q495T6 779 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 METRNLQ641Q3 311 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 AGTRAPQ6RW13 159 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 IL27RAQ6UWB1 636 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 KIAA1324Q6UXG2 1013 aaKnown RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 RPS27LQ71UM5 84 aaKnown RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 NET1Q7Z628 596 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 C11orf96Q7Z7L8 435 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 SNX32Q86XE0 403 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 VRK3Q8IV63 474 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 SCUBE1Q8IWY4 988 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 TBC1D21Q8IYX1 336 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PGAM4Q8N0Y7 254 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 KIF2BQ8N4N8 673 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 GLB1L3Q8NCI6 653 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 OR52B6Q8NGF0 335 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 STARD8Q92502 1023 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 JADE3Q92613 823 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 ROPN1LQ96C74 230 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 MOCOSQ96EN8 888 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 SCARF2Q96GP6 870 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PRR11Q96HE9 360 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PPP1R36Q96LQ0 422 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 IER2Q9BTL4 223 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 APOOQ9BUR5 198 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 EFCAB11Q9BUY7 163 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 CADM1Q9BY67 442 aaKnown RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PITHD1Q9GZP4 211 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PCED1AQ9H1Q7 454 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 OR52A5Q9H2C5 316 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 ELOVL6Q9H5J4 265 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 TNFRSF12AQ9NP84 129 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 ACSS2Q9NR19 701 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 AIG1Q9NVV5 245 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 GID8Q9NWU2 228 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 NMRK1Q9NWW6 199 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 USP36Q9P275 1121 aaKnown RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 STOX2Q9P2F5 926 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PRDM4Q9UKN5 801 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 COLQQ9Y215 455 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-215ENST00000641371 DYRK1BQ9Y463 629 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 PCDHGA11Q9Y5H2 935 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 HS3ST3A1Q9Y663 406 aa9.47□□□□□ -0.89
PHGDH-215ENST00000641371 TCRBV21S2A2A0A5A6 115 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 LOC730098B7Z3J9 87 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 PAK4O96013 591 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-215ENST00000641371 LINC00032P0C843 101 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 PRPS2P11908 318 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 JUPP14923 745 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 FOSL2P15408 326 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 COL9A1P20849 921 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 SERPINB1P30740 379 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 CPOXP36551 454 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 GNPDA1P46926 289 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 FOXA1P55317 472 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 PHEXP78562 749 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 IRF8Q02556 426 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 FOXM1Q08050 763 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 NR6A1Q15406 480 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 SNCBQ16143 134 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 HIST2H2ACQ16777 129 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-215ENST00000641371 AGKQ53H12 422 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 ZNF648Q5T619 568 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-215ENST00000641371 CACHD1Q5VU97 1274 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 HIST2H2AA3Q6FI13 130 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 GRHL2Q6ISB3 625 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 PTCRAQ6ISU1 281 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-215ENST00000641371 CRTC3Q6UUV7 619 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 RINLQ6ZS11 566 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 THOC6Q86W42 341 aaKnown RBP9.46□□□□□ -0.9
PHGDH-215ENST00000641371 ZNF547Q8IVP9 402 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 RGL4Q8IZJ4 473 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 GJD3Q8N144 294 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 FNDC5Q8NAU1 212 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 PLA2G15Q8NCC3 412 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 DNAJB8Q8NHS0 232 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 WDR34Q96EX3 536 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 UHRF1Q96T88 793 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-215ENST00000641371 ZBTB18Q99592 522 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 HOPXQ9BPY8 73 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms