RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 OR2A14Q96R47 310 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 SLC7A5P2Q9GIP4 190 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 SYTL2Q9HCH5 934 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 FBXO6Q9NRD1 293 aaPredicted RBP11.69□□□□□ -0.54
TPM4-212ENST00000590180 IARS2Q9NSE4 1012 aaKnown RBP11.69□□□□□ -0.54
TPM4-212ENST00000590180 INTS10Q9NVR2 710 aaKnown RBP11.69□□□□□ -0.54
TPM4-212ENST00000590180 RNF14Q9UBS8 474 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 CROTQ9UKG9 612 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
TPM4-212ENST00000590180 FAM169AQ9Y6X4 670 aa11.69□□□□□ -0.54
TPM4-212ENST00000590180 TMEM150CB9EJG8 249 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 CCDC188H7C350 402 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 KLK3P07288 261 aaPredicted RBP11.68□□□□□ -0.54
TPM4-212ENST00000590180 PRKAR1AP10644 381 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 PGAM1P18669 254 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 CD9P21926 228 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 F8A1P23610 371 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 CASQ1P31415 396 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 STAT5AP42229 794 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 MAGEA3P43357 314 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 RAB28P51157 221 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 MC1RQ01726 317 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 KIR2DS3Q14952 304 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 HSP90AA5PQ58FG0 334 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 HP1BP3Q5SSJ5 553 aaPredicted RBP11.68□□□□□ -0.54
TPM4-212ENST00000590180 PRAMEF17Q5VTA0 474 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 CNSTQ6PJW8 725 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 TAX1BP1Q86VP1 789 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 DCUN1D3Q8IWE4 304 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 FAM20CQ8IXL6 584 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 C17orf53Q8N3J3 647 aaPredicted RBP11.68□□□□□ -0.54
TPM4-212ENST00000590180 ZBTB2Q8N680 514 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.68□□□□□ -0.54
TPM4-212ENST00000590180 RAD51AP1Q96B01 352 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 CLIP3Q96DZ5 547 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 KRT12Q99456 494 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 EBNA1BP2Q99848 306 aaKnown RBP11.68□□□□□ -0.54
TPM4-212ENST00000590180 PITPNM3Q9BZ71 974 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 TRIM31Q9BZY9 425 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 LHX9Q9NQ69 397 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.68□□□□□ -0.54
TPM4-212ENST00000590180 GALPQ9UBC7 116 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 FBXO5Q9UKT4 447 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 PCDHB3Q9Y5E6 796 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 MRFAP1Q9Y605 127 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 MRPS18BQ9Y676 258 aaKnown RBP11.68□□□□□ -0.54
TPM4-212ENST00000590180 NFS1Q9Y697 457 aa11.68□□□□□ -0.54
TPM4-212ENST00000590180 FASNP49327 2511 aaKnown RBP11.68□□□□□ -0.54
TPM4-212ENST00000590180 A0A0J9YY10 115 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 TTI1O43156 1089 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 BANF1O75531 89 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 HAUS5O94927 633 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 ITGB2P05107 769 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 CYP2A7P20853 494 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 IVDP26440 423 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 PKLRP30613 574 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 SLC1A2P43004 574 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 BDKRB1P46663 353 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 ADARP55265 1226 aaKnown RBP11.67□□□□□ -0.54
TPM4-212ENST00000590180 C19orf57Q0VDD7 668 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 MORF4L2Q15014 288 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 SF1Q15637 639 aaKnown RBP11.67□□□□□ -0.54
TPM4-212ENST00000590180 LINC00303Q3SY05 128 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 MSS51Q4VC12 460 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 ACSBG2Q5FVE4 666 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 FAM199XQ6PEV8 388 aaPredicted RBP11.67□□□□□ -0.54
TPM4-212ENST00000590180 CDHR3Q6ZTQ4 885 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 KCNMB4Q86W47 210 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 LMNTD2Q8IXW0 634 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 PDIK1LQ8N165 341 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 RAB42Q8N4Z0 105 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 OR1L3Q8NH93 324 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 GABPB2Q8TAK5 448 aaPredicted RBP11.67□□□□□ -0.54
TPM4-212ENST00000590180 MAGEC3Q8TD91 643 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 MR1Q95460 341 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 TCTN2Q96GX1 697 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 PWWP2AQ96N64 755 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 TRIM51Q9BSJ1 452 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 AKIRIN1Q9H9L7 192 aaPredicted RBP11.67□□□□□ -0.54
TPM4-212ENST00000590180 FAM60AQ9NP50 221 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 IRAK4Q9NWZ3 460 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 KCND3Q9UK17 655 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 RUVBL2Q9Y230 463 aaKnown RBP11.67□□□□□ -0.54
TPM4-212ENST00000590180 KLHL20Q9Y2M5 609 aa11.67□□□□□ -0.54
TPM4-212ENST00000590180 EFCAB8A8MWE9 144 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 E7EQ34 232 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 RASGRF2O14827 1237 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 CPNE3O75131 537 aaKnown RBP11.66□□□□□ -0.54
TPM4-212ENST00000590180 C1orf105O95561 183 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 TTC4O95801 387 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 ERVK-10P10266 1014 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 CCNFP41002 786 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 CARSP49589 748 aaKnown RBP11.66□□□□□ -0.54
TPM4-212ENST00000590180 ITGA8P53708 1063 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 ITGA1P56199 1179 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 RPS15P62841 145 aaKnown RBP11.66□□□□□ -0.54
TPM4-212ENST00000590180 MRPS25P82663 173 aaKnown RBP11.66□□□□□ -0.54
TPM4-212ENST00000590180 MPP1Q00013 466 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 DNASE1L3Q13609 305 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 ERV3-1Q14264 604 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms