RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 OR6C74A6NCV1 312 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CLDN25C9JDP6 229 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 H3BNC9 293 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 AURKAO14965 403 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 COCHO43405 550 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ATG13O75143 517 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 GLRA3O75311 464 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CCNDBP1O95273 360 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ALDOAP04075 364 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 POLBP06746 335 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 MMP2P08253 660 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ERVK-10P10266 1014 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 TACR2P21452 398 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ATP6V0D1P61421 351 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CLCQ05315 142 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CDH17Q12864 832 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 NAPEPLDQ6IQ20 393 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 TMEM150AQ86TG1 271 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 DDX53Q86TM3 631 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF527Q8NB42 609 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 RP9Q8TA86 221 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 HTRA1Q92743 480 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ISL2Q96A47 359 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 RAB7BQ96AH8 199 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 MFSD3Q96ES6 412 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF486Q96H40 463 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 TBL1YQ9BQ87 522 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 EFHD1Q9BUP0 239 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 ADI1Q9BV57 179 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 IL22Q9GZX6 179 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 MKRN2Q9H000 416 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 NANOGQ9H9S0 305 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 MCCC2Q9HCC0 563 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CHRAC1Q9NRG0 131 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 COPG2Q9UBF2 871 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 NUP50Q9UKX7 468 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 CNOT6Q9ULM6 557 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 AAR2Q9Y312 384 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 YIPF1Q9Y548 306 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 PCM1Q15154 2024 aa7.84□□□□□ -1.15
PDLIM5-221ENST00000542407 FAM172BPA6NC97 362 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TRIM38O00635 465 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PSMD3O43242 534 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 B4GAT1O43505 415 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SNAP29O95721 258 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 EDN3P14138 238 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TPH1P17752 444 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 MPSTP25325 297 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 CNTFP26441 200 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TYK2P29597 1187 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TTKP33981 857 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 MAGEA12P43365 314 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 CSRP3P50461 194 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 RNF4P78317 190 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 RAB33AQ14088 237 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC14A2Q15849 920 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 MINDY4Q4G0A6 757 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 UBE2UQ5VVX9 321 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 HMBOX1Q6NT76 420 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 FBXO46Q6PJ61 603 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC9B2Q86UD5 537 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 CCDC117Q8IWD4 279 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 BBS7Q8IWZ6 715 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PGBD5Q8N414 524 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TBC1D19Q8N5T2 526 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TERB1Q8NA31 727 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ABHD11Q8NFV4 315 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 OR7D4Q8NG98 312 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 FOXJ1Q92949 421 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 IMP4Q96G21 291 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ZC3H10Q96K80 434 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 CDK5RAP1Q96SZ6 601 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC6A17Q9H1V8 727 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PDFQ9HBH1 243 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 GLRX2Q9NS18 164 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 RBM22Q9NW64 420 aaKnown RBP eCLIP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 BFARQ9NZS9 450 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ANKMY1Q9P2S6 941 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TSR3Q9UJK0 312 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 DNMT3LQ9UJW3 386 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 B3GNT3Q9Y2A9 372 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ANAPC1Q9H1A4 1944 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ZBBXA8MT70 800 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 E7ENX8 843 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PSMD9O00233 223 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TSPAN6O43657 245 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SYNCRIPO60506 623 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 NDUFS2O75306 463 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ANXA9O76027 345 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 KLKB1P03952 638 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PRKCGP05129 697 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 CHRNGP07510 517 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 LAG3P18627 525 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 NMBRP28336 390 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SERPINB1P30740 379 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ATP5C1P36542 298 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 AP2S1P53680 142 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PRKAA2P54646 552 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PSME3P61289 254 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 COPZ1P61923 177 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms