RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 MRNIPQ6NTE8 343 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 ADGRF3Q8IZF5 1079 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 OR4E2Q8NGC2 313 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 OR52E1Q8NGJ3 308 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 ELMO1Q92556 727 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 MFSD3Q96ES6 412 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 BIRC8Q96P09 236 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 FERD3LQ96RJ6 166 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 TSSK1BQ9BXA7 367 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 GPR87Q9BY21 358 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 SRMSQ9H3Y6 488 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 FGF21Q9NSA1 209 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 TRMT1Q9NXH9 659 aaKnown RBP12.05□□□□□ -0.48
PRKDC-207ENST00000536483 OR6C2Q9NZP2 312 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 VPS4AQ9UN37 437 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 UBA6A0AVT1 1052 aaPredicted RBP12.04□□□□□ -0.48
PRKDC-207ENST00000536483 USP27XA6NNY8 438 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 BTN3A3O00478 584 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 KPNA5O15131 536 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 AVILO75366 819 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 VAPBO95292 243 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 OGNP20774 298 aaKnown RBP12.04□□□□□ -0.48
PRKDC-207ENST00000536483 IVDP26440 423 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 PTPN4P29074 926 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 PRDX3P30048 256 aaKnown RBP12.04□□□□□ -0.48
PRKDC-207ENST00000536483 ARL4DP49703 201 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 CCL11P51671 97 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 RPS15P62841 145 aaKnown RBP12.04□□□□□ -0.48
PRKDC-207ENST00000536483 TUBB4BP68371 445 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 CBLBQ13191 982 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 TUBB2AQ13885 445 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 KRT33BQ14525 404 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 GBX1Q14549 363 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 UGT8Q16880 541 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 NADK2Q4G0N4 442 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 RNF187Q5TA31 235 aaPredicted RBP12.04□□□□□ -0.48
PRKDC-207ENST00000536483 CPZQ66K79 652 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 ZNF517Q6ZMY9 492 aaPredicted RBP12.04□□□□□ -0.48
PRKDC-207ENST00000536483 SDCCAG8Q86SQ7 713 aaPredicted RBP12.04□□□□□ -0.48
PRKDC-207ENST00000536483 AMIGO1Q86WK6 493 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 CREG2Q8IUH2 290 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 LMNTD2Q8IXW0 634 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 PHC3Q8NDX5 983 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 CPT1CQ8TCG5 803 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 THAP4Q8WY91 577 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 SEC14L1Q92503 715 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 LPGAT1Q92604 370 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 SIGLEC10Q96LC7 697 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 SERPINB12Q96P63 405 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 PANX3Q96QZ0 392 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 TUBB2BQ9BVA1 445 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 KLHL42Q9P2K6 505 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 RNF14Q9UBS8 474 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 FAM8A1Q9UBU6 413 aa12.04□□□□□ -0.48
PRKDC-207ENST00000536483 FARSAQ9Y285 508 aaKnown RBP12.04□□□□□ -0.48
PRKDC-207ENST00000536483 TNRC6AQ8NDV7 1962 aaKnown RBP12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ZCWPW2A0A1B0GU75 182 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ARGFXA6NJG6 315 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 H3BMM5 538 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 BTN3A1O00481 513 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 PFDN6O15212 129 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ZNF185O15231 689 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 SCRG1O75711 98 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 AGFG2O95081 481 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ESR1P03372 595 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 POLR2CP19387 275 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ATP5DP30049 168 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 SHMT2P34897 504 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 PTGIRP43119 386 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 PGDP52209 483 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 PRKAA1Q13131 559 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 IL10RAQ13651 578 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 GPR19Q15760 415 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 KYNUQ16719 465 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ANKRD20A4Q4UJ75 823 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 PLEKHS1Q5SXH7 462 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 RNASEH2BQ5TBB1 312 aaKnown RBP12.03□□□□□ -0.48
PRKDC-207ENST00000536483 FHL5Q5TD97 284 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ARMC6Q6NXE6 501 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 UNC5DQ6UXZ4 953 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 SYDE1Q6ZW31 735 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-207ENST00000536483 SYVN1Q86TM6 617 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 CILP2Q8IUL8 1156 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 PPIL6Q8IXY8 311 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 GALNT11Q8NCW6 608 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 OR5AR1Q8NGP9 310 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 FLVCR1-AS1Q8TAF5 88 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 MR1Q95460 341 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ZNF501Q96CX3 271 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-207ENST00000536483 LRFN5Q96NI6 719 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 RUNDC3BQ96NL0 473 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 MENTQ9BUN1 341 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 SLC25A23Q9BV35 468 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ING2Q9H160 280 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ACSS2Q9NR19 701 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 ENAMQ9NRM1 1142 aa12.03□□□□□ -0.48
PRKDC-207ENST00000536483 INTS10Q9NVR2 710 aaKnown RBP12.03□□□□□ -0.48
PRKDC-207ENST00000536483 GNPTGQ9UJJ9 305 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms