RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GKN1Q9NS71 199 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 DNAJC17Q9NVM6 304 aaKnown RBP5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 KCNS2Q9ULS6 477 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 CGNL1Q0VF96 1302 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 TAF1P21675 1872 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 SDR42E2A6NKP2 422 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 DUXAA6NLW8 204 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 DDX39AO00148 427 aaKnown RBP5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 FCGR3BO75015 233 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 RTN2O75298 545 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 C9P02748 559 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 STMN1P16949 149 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 HOXA11P31270 313 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 CASP3P42574 277 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 KHKP50053 298 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZNF81P51508 661 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 CLDN15P56746 228 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 ST8SIA6P61647 398 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 RPS18P62269 152 aaKnown RBP5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 CX3CL1P78423 397 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 RCN2Q14257 317 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 CCDC142Q17RM4 750 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 KBTBD12Q3ZCT8 623 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 C11orf63Q6NUN7 778 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZNF549Q6P9A3 640 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 LONP2Q86WA8 852 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 SFR1Q86XK3 245 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 IQCF1Q8N6M8 205 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 DBF4BQ8NFT6 615 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 VANGL1Q8TAA9 524 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 LNX1Q8TBB1 728 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 MGARPQ8TDB4 240 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 STAMBPL1Q96FJ0 436 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 BICD1Q96G01 975 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZNF778Q96MU6 729 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZNF48Q96MX3 618 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZNF350Q9GZX5 532 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 MINDY3Q9H8M7 445 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 EBF2Q9HAK2 575 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 TRPC7Q9HCX4 862 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 DNAJC4Q9NNZ3 241 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 MID1IP1Q9NPA3 183 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZNF701Q9NV72 531 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 SPHK1Q9NYA1 384 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 CNIH4Q9P003 139 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 TXNDC16Q9P2K2 825 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 MTUS1Q9ULD2 1270 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 TRIM17Q9Y577 477 aa5.01□□□□□ -1.61
HMGB1P46-201ENST00000520062 PCDH11YQ9BZA8 1340 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 A0A1W2PPK0 400 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 MAGEA13PA6NCF6 341 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 MYMKA6NI61 221 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 C4orf47A7E2U8 309 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 GAPDHSO14556 408 aaPredicted RBP5□□□□□ -1.61
HMGB1P46-201ENST00000520062 SELENOFO60613 162 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 KINO60870 393 aaKnown RBP5□□□□□ -1.61
HMGB1P46-201ENST00000520062 SLC22A3O75751 556 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 PNPP00491 289 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 KRT19P08727 400 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 CKMT2P17540 419 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 HLA-DPA1P20036 260 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 FRKP42685 505 aaPredicted RBP5□□□□□ -1.61
HMGB1P46-201ENST00000520062 RPL21P46778 160 aaKnown RBP5□□□□□ -1.61
HMGB1P46-201ENST00000520062 C17orf67Q0P5P2 114 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 GAGE5Q13069 117 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 GAGE6Q13070 117 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 SNTA1Q13424 505 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 MCMDC2Q4G0Z9 681 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 CASC4Q6P4E1 433 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 C9orf47Q6ZRZ4 202 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 ARHGAP22Q7Z5H3 698 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 NRARPQ7Z6K4 114 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 SIAH3Q8IW03 269 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 CLYBLQ8N0X4 340 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 ANKRD13CQ8N6S4 541 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 BMPERQ8N8U9 685 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 NPEPL1Q8NDH3 523 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 RIT1Q92963 219 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 CENPTQ96BT3 561 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 SNRNP40Q96DI7 357 aaKnown RBP5□□□□□ -1.61
HMGB1P46-201ENST00000520062 LINGO1Q96FE5 620 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 ADGRG7Q96K78 797 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 RAD9AQ99638 391 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 SLC29A3Q9BZD2 475 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 CSTL1Q9H114 145 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 POU2F3Q9UKI9 436 aa5□□□□□ -1.61
HMGB1P46-201ENST00000520062 TRAV24A0A0B4J272 114 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 A0A1W2PPW3 197 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 A0A1W2PRB8 838 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 HNRNPCL2B2RXH8 293 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 HTATSF1O43719 755 aaKnown RBP4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 THEGLP0DJG4 465 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 SMIM18P0DKX4 95 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 ACP2P11117 423 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 CDH1P12830 882 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 IRF2P14316 349 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 ITIH1P19827 911 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 PTMSP20962 102 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 ATP6V1E1P36543 226 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 PDX1P52945 283 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms