RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 SKA1Q96BD8 255 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 C3orf30Q96M34 536 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 MIR1-1HGQ9H1L0 117 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 TUBB1Q9H4B7 451 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 RMI1Q9H9A7 625 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 DNAJC28Q9NX36 388 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 SCHIP1Q9P0W5 487 aaPredicted RBP16.38■□□□□ 0.21
NELFCD-201ENST00000460601 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.38■□□□□ 0.21
NELFCD-201ENST00000460601 TDRKHQ9Y2W6 561 aaKnown RBP16.38■□□□□ 0.21
NELFCD-201ENST00000460601 PRR19A6NJB7 356 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 CCT8L1PA6NM43 557 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 METTL12A8MUP2 240 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 ESRRBO95718 433 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 MLYCDO95822 493 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 GGT5P36269 586 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 SLC6A12P48065 614 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 PIK3CGP48736 1102 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 CCR3P51677 355 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 CTBSQ01459 385 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 PLOD1Q02809 727 aaPredicted RBP16.37■□□□□ 0.21
NELFCD-201ENST00000460601 TRAF3Q13114 568 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 RPA4Q13156 261 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 FASTKQ14296 549 aaKnown RBP16.37■□□□□ 0.21
NELFCD-201ENST00000460601 KANK2Q63ZY3 851 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 AGTRAPQ6RW13 159 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 ZNF480Q8WV37 535 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 EDAQ92838 391 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 ATP6V1E2Q96A05 226 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 C12orf66Q96MD2 445 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 INSM2Q96T92 566 aaPredicted RBP16.37■□□□□ 0.21
NELFCD-201ENST00000460601 IMP3Q9NV31 184 aaKnown RBP16.37■□□□□ 0.21
NELFCD-201ENST00000460601 TBC1D29Q9UFV1 150 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 ANGPTL3Q9Y5C1 460 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 PDZK1P1A8MUH7 402 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 AZIN1O14977 448 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 WNT1P04628 370 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 RABIFP47224 123 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 HNMTP50135 292 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 YPEL5P62699 121 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 NAE1Q13564 534 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 TSTA3Q13630 321 aaPredicted RBP16.37■□□□□ 0.21
NELFCD-201ENST00000460601 GRB7Q14451 532 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 TMEM198Q66K66 360 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 SCIMPQ6UWF3 145 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 GPRIN3Q6ZVF9 776 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 MYLK4Q86YV6 388 aaPredicted RBP16.37■□□□□ 0.21
NELFCD-201ENST00000460601 FBXL8Q96CD0 374 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 CCDC138Q96M89 665 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 OR4K3Q96R72 315 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 ZNF382Q96SR6 550 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 SLC32A1Q9H598 525 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 GIMAP2Q9UG22 337 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 DMTF1Q9Y222 760 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 LRP4O75096 1905 aa16.37■□□□□ 0.21
NELFCD-201ENST00000460601 IFRD1O00458 451 aaPredicted RBP16.36■□□□□ 0.21
NELFCD-201ENST00000460601 PRAMEF4O60810 478 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 UBOX5O94941 541 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 CELA2BP08218 269 aaPredicted RBP16.36■□□□□ 0.21
NELFCD-201ENST00000460601 EPB42P16452 691 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 KELP23276 732 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 SRSF5Q13243 272 aaKnown RBP16.36■□□□□ 0.21
NELFCD-201ENST00000460601 UBAP2LQ14157 1087 aaKnown RBP16.36■□□□□ 0.21
NELFCD-201ENST00000460601 FZD2Q14332 565 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 LSM12Q3MHD2 195 aaKnown RBP16.36■□□□□ 0.21
NELFCD-201ENST00000460601 PRAMEF9Q5VWM5 478 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 CAPRIN2Q6IMN6 1127 aaKnown RBP16.36■□□□□ 0.21
NELFCD-201ENST00000460601 SUSD1Q6UWL2 747 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 CLYBLQ8N0X4 340 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 TWIST2Q8WVJ9 160 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 MARK4Q96L34 752 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 SIKE1Q9BRV8 207 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 RNF11Q9Y3C5 154 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 SPTY2D1-AS1A0A0U1RR47 76 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 MYO1CO00159 1063 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 SDHDO14521 159 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 PIP5K1BO14986 540 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 CAPN1P07384 714 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 FGF4P08620 206 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 CCNG1P51959 295 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 EIF2B5Q13144 721 aaKnown RBP16.36■□□□□ 0.21
NELFCD-201ENST00000460601 CLNKQ7Z7G1 428 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 SFTPA2Q8IWL1 248 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 SYTL1Q8IYJ3 562 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 SNX31Q8N9S9 440 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 OR5K2Q8NHB8 316 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 TCF7L2Q9NQB0 619 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 ACSL5Q9ULC5 683 aa16.36■□□□□ 0.21
NELFCD-201ENST00000460601 G3BP2Q9UN86 482 aaKnown RBP16.36■□□□□ 0.21
NELFCD-201ENST00000460601 APOBEC2Q9Y235 224 aaKnown RBP16.36■□□□□ 0.21
NELFCD-201ENST00000460601 TTC28Q96AY4 2481 aa16.35■□□□□ 0.21
NELFCD-201ENST00000460601 FCHO1O14526 889 aa16.35■□□□□ 0.21
NELFCD-201ENST00000460601 FFAR3O14843 346 aa16.35■□□□□ 0.21
NELFCD-201ENST00000460601 GPR42O15529 346 aa16.35■□□□□ 0.21
NELFCD-201ENST00000460601 MAP3K13O43283 966 aa16.35■□□□□ 0.21
NELFCD-201ENST00000460601 CRCPO75575 148 aa16.35■□□□□ 0.21
NELFCD-201ENST00000460601 DCTN3O75935 186 aa16.35■□□□□ 0.21
NELFCD-201ENST00000460601 SNUPNO95149 360 aaKnown RBP16.35■□□□□ 0.21
NELFCD-201ENST00000460601 LINC00032P0C843 101 aa16.35■□□□□ 0.21
NELFCD-201ENST00000460601 AOC1P19801 751 aa16.35■□□□□ 0.21
NELFCD-201ENST00000460601 CD27P26842 260 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms