RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MAFFQ9ULX9 164 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ERVK-11Q9UQG0 969 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 GPSM3Q9Y4H4 160 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 POLR3HQ9Y535 204 aaPredicted RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 BCL9O00512 1426 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 A0A1B0GVM2 712 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TCAF2A6NFQ2 919 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 MOXD2PA6NHM9 499 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 PRR5-ARHGAP8B1AHC4 643 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 NPHS1O60500 1241 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CTPS1P17812 591 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 GLRA2P23416 452 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CDKN2CP42773 168 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ARHGAP8P85298 464 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CDK10Q15131 360 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 NCEH1Q6PIU2 408 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 PDZD9Q8IXQ8 264 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FBXL16Q8N461 479 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FAM136AQ96C01 138 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 AURKBQ96GD4 344 aaPredicted RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 BIN3Q9NQY0 253 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TSPAN16Q9UKR8 245 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF609O15014 1411 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ADAMTS3O15072 1205 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 RENP00797 406 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CDH1P12830 882 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CCNB1P14635 433 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 NCK1P16333 377 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 RPA4Q13156 261 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 GFOD2Q3B7J2 385 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 BBS12Q6ZW61 710 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 GMCL1P1Q8NEA9 526 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 TRIM43Q96BQ3 446 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 FUZQ9BT04 418 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 MAT2BQ9NZL9 334 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CDH10Q9Y6N8 788 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 GRIN2DO15399 1336 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 KIF1AQ12756 1690 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 LRRC10BA6NIK2 292 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 NME6O75414 186 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 GJB6O95452 261 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZBTB48P10074 688 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PORP16435 677 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 YBX3P16989 372 aaKnown RBP eCLIP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 EPHA3P29320 983 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CD40LGP29965 261 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 RYKP34925 604 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PLK1P53350 603 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PSMA6P60900 246 aaKnown RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF404Q494X3 552 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 FAM46CQ5VWP2 391 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ACBD4Q8NC06 268 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PLEKHO2Q8TD55 490 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 QPCTLQ9NXS2 382 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 AZGP1P25311 298 aaKnown RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 MIPP30301 263 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PRKAG1P54619 331 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CD83Q01151 205 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 GNMTQ14749 295 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SSX2Q16385 188 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 MPPE1Q53F39 396 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PARGQ86W56 976 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 VANGL1Q8TAA9 524 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SSX3Q99909 188 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 POLR2J2Q9GZM3 115 aaKnown RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PCBD2Q9H0N5 130 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZFP14Q9HCL3 533 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 RNF186Q9NXI6 227 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 IFT52Q9Y366 437 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PCDHB3Q9Y5E6 796 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ATP6AP2A0A1C7CYW4 349 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 LRRN3E7EW58 273 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 HCN1O60741 890 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF823P16415 610 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 LPOP22079 712 aaPredicted RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CCR10P46092 362 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ASB18Q6ZVZ8 466 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 SLC16A9Q7RTY1 509 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ZC3HC1Q86WB0 502 aaKnown RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 KLHL6Q8WZ60 621 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 NDRG1Q92597 394 aaKnown RBP7.05□□□□□ -1.28
COLCA1-205ENST00000620864 WNT8BQ93098 351 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CXorf40BQ96DE9 158 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 MALSU1Q96EH3 234 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 HSFY1Q96LI6 401 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 HYLS1Q96M11 299 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 PHOX2BQ99453 314 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 HERC2P3Q9BVR0 1158 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 LRRN3Q9H3W5 708 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 BLOC1S4Q9NUP1 217 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 ARL8BQ9NVJ2 186 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 MOCS1Q9NZB8 636 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 AGAP5A6NIR3 686 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 MICAL2O94851 1124 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 IL32P24001 234 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 CHMP24386 653 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 HTR1BP28222 390 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 TM4SF1P30408 202 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 MAGEA3P43357 314 aa7.05□□□□□ -1.28
COLCA1-205ENST00000620864 KHKP50053 298 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms