RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PCSK1NQ9UHG2 260 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 ITGA11Q9UKX5 1188 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 R3HDM2Q9Y2K5 976 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 AAR2Q9Y312 384 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 STRAPQ9Y3F4 350 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 A0A0A0MQY5 61 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 A0A1B0GVM2 712 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 FAM86B1E9PN63 330 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 HCRTR2O43614 444 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 PLRG1O43660 514 aaKnown RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 GMFGO60234 142 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 GPC4O75487 556 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 AKAP3O75969 853 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 LETM1O95202 739 aaPredicted RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 CBX6O95503 412 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 MT-ATP6P00846 226 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 RLN1P04808 185 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 VIMP08670 466 aaKnown RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 FCGR2AP12318 317 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 MYF6P23409 242 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 AHCYP23526 432 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 DNASE1P24855 282 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 CHRNA3P32297 505 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 ATP5OP48047 213 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 SUOXP51687 545 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 ERVK11-1P61568 191 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 BEX3Q00994 111 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 CYP4A11Q02928 519 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 DMTNQ08495 405 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 ELP6Q0PNE2 266 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 RIPK1Q13546 671 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 SNX1Q13596 522 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 FGFBP1Q14512 234 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 IMMTQ16891 758 aaKnown RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 C14orf177Q52M58 125 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 IFI44LQ53G44 452 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 KCNT1Q5JUK3 1230 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 SERTAD4-AS1Q5TG53 156 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 TYW3Q6IPR3 259 aaKnown RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 UNQ6126/PRO20091Q6UXV3 157 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 GDPD4Q6W3E5 623 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 CFAP77Q6ZQR2 320 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 TUBA1AQ71U36 451 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 TRIM74Q86UV6 250 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 TRIM73Q86UV7 250 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 MYPOPQ86VE0 399 aaPredicted RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 TDRPQ86YL5 185 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 KDM8Q8N371 416 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 HJURPQ8NCD3 748 aaPredicted RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 CFAP61Q8NHU2 1237 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 SGCDQ92629 289 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 MOAP1Q96BY2 351 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 PABPC5Q96DU9 382 aaKnown RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 SCMH1Q96GD3 660 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 SPATA13Q96N96 652 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 ZNF830Q96NB3 372 aaPredicted RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 DUX3Q96PT4 197 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 TUBA1CQ9BQE3 449 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 ERP44Q9BS26 406 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 THUMPD2Q9BTF0 503 aaKnown RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 CARD6Q9BX69 1037 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 GPR88Q9GZN0 384 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 ZNF644Q9H582 1327 aaPredicted RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 UBTD1Q9HAC8 227 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 TUFT1Q9NNX1 390 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 ASAH2Q9NR71 780 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 DNAJC17Q9NVM6 304 aaKnown RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.59□□□□□ -1.67
CHD9-220ENST00000569794 ABI3Q9P2A4 366 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 FBXW11Q9UKB1 542 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 GMEB2Q9UKD1 530 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 CAB39Q9Y376 341 aaPredicted RBP4.59□□□□□ -1.67
CHD9-220ENST00000569794 PCDHAC2Q9Y5I4 1007 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 CLDN16Q9Y5I7 305 aa4.59□□□□□ -1.67
CHD9-220ENST00000569794 A0A0G2JPF8 293 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 CTAGE15A4D2H0 777 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 TMEM247A6NEH6 219 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 ZSCAN5CA6NGD5 496 aaPredicted RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 DDTLA6NHG4 134 aaPredicted RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 HNRNPCL3B7ZW38 293 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 CCDC188H7C350 402 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 CLIC2O15247 247 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 CRCPO75575 148 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 PTBP3O95758 552 aaKnown RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 TGFAP01135 160 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 FAM86B2P0C5J1 330 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 CTAGE8P0CG41 777 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 HNRNPCL4P0DMR1 293 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 GJA1P17302 382 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 GPTP24298 496 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 CDAP32320 146 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 GJC1P36383 396 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 PTPN9P43378 593 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 PITPNBP48739 271 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 CLCN3P51790 818 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 GBX2P52951 348 aaPredicted RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 CCNA1P78396 465 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 PHEXP78562 749 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 TFAP4Q01664 338 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 TROAPQ12815 778 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms