RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 AEBP2Q6ZN18 517 aaPredicted RBP35.49■■■■□ 3.27
CHD9-220ENST00000569794 CHIC1Q5VXU3 224 aa33.71■■■□□ 2.99
CHD9-220ENST00000569794 SENP3Q9H4L4 574 aaPredicted RBP30.26■■■□□ 2.43
CHD9-220ENST00000569794 PHF23Q9BUL5 403 aaPredicted RBP29.86■■■□□ 2.37
CHD9-220ENST00000569794 FOXD1Q16676 465 aa28.2■■■□□ 2.1
CHD9-220ENST00000569794 PLPPR3Q6T4P5 718 aa26.94■■□□□ 1.9
CHD9-220ENST00000569794 PPP6R1Q9UPN7 881 aa26.39■■□□□ 1.82
CHD9-220ENST00000569794 MSH5O43196 834 aa26.38■■□□□ 1.81
CHD9-220ENST00000569794 PIAS4Q8N2W9 510 aaPredicted RBP26.35■■□□□ 1.81
CHD9-220ENST00000569794 ADRA2BP18089 450 aa26.3■■□□□ 1.8
CHD9-220ENST00000569794 POTEDQ86YR6 584 aa25.72■■□□□ 1.71
CHD9-220ENST00000569794 MAPK8IP2Q13387 824 aaPredicted RBP24.15■■□□□ 1.46
CHD9-220ENST00000569794 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
CHD9-220ENST00000569794 DMRT2Q9Y5R5 561 aa24■■□□□ 1.43
CHD9-220ENST00000569794 PPP4R3CPQ6ZMV5 832 aa23.61■■□□□ 1.37
CHD9-220ENST00000569794 CNKSR2Q8WXI2 1034 aa23.16■■□□□ 1.3
CHD9-220ENST00000569794 HOXD11P31277 338 aaPredicted RBP23.13■■□□□ 1.29
CHD9-220ENST00000569794 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
CHD9-220ENST00000569794 RNF216Q9NWF9 866 aaPredicted RBP22.96■■□□□ 1.27
CHD9-220ENST00000569794 NCBP3Q53F19 620 aaKnown RBP22.7■■□□□ 1.22
CHD9-220ENST00000569794 CACNB1Q02641 598 aaPredicted RBP22.62■■□□□ 1.21
CHD9-220ENST00000569794 RNF39Q9H2S5 420 aa22.53■■□□□ 1.2
CHD9-220ENST00000569794 NPM3O75607 178 aaKnown RBP22.39■■□□□ 1.17
CHD9-220ENST00000569794 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
CHD9-220ENST00000569794 C1QBPQ07021 282 aaKnown RBP22.19■■□□□ 1.14
CHD9-220ENST00000569794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.02■■□□□ 1.12
CHD9-220ENST00000569794 KCNA4P22459 653 aa21.97■■□□□ 1.11
CHD9-220ENST00000569794 U3KPZ7 1027 aaPredicted RBP21.57■■□□□ 1.04
CHD9-220ENST00000569794 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
CHD9-220ENST00000569794 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
CHD9-220ENST00000569794 CAPN15O75808 1086 aa21.2■□□□□ 0.98
CHD9-220ENST00000569794 DSG3P32926 999 aa21.09■□□□□ 0.97
CHD9-220ENST00000569794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
CHD9-220ENST00000569794 HNRNPUL2Q1KMD3 747 aaKnown RBP20.96■□□□□ 0.95
CHD9-220ENST00000569794 APLP2Q06481 763 aa20.95■□□□□ 0.94
CHD9-220ENST00000569794 TRHP20396 242 aaPredicted RBP20.86■□□□□ 0.93
CHD9-220ENST00000569794 SAMD1Q6SPF0 538 aaPredicted RBP20.85■□□□□ 0.93
CHD9-220ENST00000569794 ZNF219Q9P2Y4 722 aaPredicted RBP20.84■□□□□ 0.93
CHD9-220ENST00000569794 SLC4A1APQ9BWU0 796 aaKnown RBP20.74■□□□□ 0.91
CHD9-220ENST00000569794 ABCB7O75027 752 aa20.72■□□□□ 0.91
CHD9-220ENST00000569794 MYCNP04198 464 aaPredicted RBP20.7■□□□□ 0.9
CHD9-220ENST00000569794 FOXD4L1Q9NU39 408 aa20.5■□□□□ 0.87
CHD9-220ENST00000569794 POLA2Q14181 598 aa20.32■□□□□ 0.84
CHD9-220ENST00000569794 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
CHD9-220ENST00000569794 ZBTB22O15209 634 aa20.22■□□□□ 0.83
CHD9-220ENST00000569794 POTEHQ6S545 545 aa20.16■□□□□ 0.82
CHD9-220ENST00000569794 RBM42Q9BTD8 480 aaKnown RBP20.11■□□□□ 0.81
CHD9-220ENST00000569794 ZBTB12Q9Y330 459 aaPredicted RBP19.92■□□□□ 0.78
CHD9-220ENST00000569794 ATXN8OSP0DMR3 200 aa19.87■□□□□ 0.77
CHD9-220ENST00000569794 CHRDL2Q6WN34 429 aa19.68■□□□□ 0.74
CHD9-220ENST00000569794 OSCARQ8IYS5 282 aa19.68■□□□□ 0.74
CHD9-220ENST00000569794 AKT1S1Q96B36 256 aa19.66■□□□□ 0.74
CHD9-220ENST00000569794 REM2Q8IYK8 340 aaPredicted RBP19.48■□□□□ 0.71
CHD9-220ENST00000569794 FBLN2P98095 1184 aa19.42■□□□□ 0.7
CHD9-220ENST00000569794 MKRN4PQ13434 485 aaPredicted RBP19.31■□□□□ 0.68
CHD9-220ENST00000569794 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
CHD9-220ENST00000569794 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
CHD9-220ENST00000569794 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
CHD9-220ENST00000569794 CSRNP3Q8WYN3 585 aa19.29■□□□□ 0.68
CHD9-220ENST00000569794 PITPNM1O00562 1244 aa19.28■□□□□ 0.68
CHD9-220ENST00000569794 PIP4P2Q8N4L2 257 aa19.22■□□□□ 0.67
CHD9-220ENST00000569794 FXR2P51116 673 aaKnown RBP eCLIP19.11■□□□□ 0.65
CHD9-220ENST00000569794 ZNF692Q9BU19 519 aaPredicted RBP19.06■□□□□ 0.64
CHD9-220ENST00000569794 SSUH2Q9Y2M2 353 aa19.06■□□□□ 0.64
CHD9-220ENST00000569794 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
CHD9-220ENST00000569794 SPDYE1Q8NFV5 336 aaPredicted RBP18.96■□□□□ 0.63
CHD9-220ENST00000569794 SP7Q8TDD2 431 aaPredicted RBP18.91■□□□□ 0.62
CHD9-220ENST00000569794 CLEC11AQ9Y240 323 aa18.9■□□□□ 0.62
CHD9-220ENST00000569794 HAX1O00165 279 aa18.84■□□□□ 0.61
CHD9-220ENST00000569794 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHD9-220ENST00000569794 PRKAR2AP13861 404 aaKnown RBP18.77■□□□□ 0.6
CHD9-220ENST00000569794 EVX2Q03828 476 aa18.63■□□□□ 0.57
CHD9-220ENST00000569794 PRR29P0C7W0 189 aa18.6■□□□□ 0.57
CHD9-220ENST00000569794 CHADLQ6NUI6 762 aa18.56■□□□□ 0.56
CHD9-220ENST00000569794 C19orf67A6NJJ6 358 aa18.5■□□□□ 0.55
CHD9-220ENST00000569794 SPDYE4A6NLX3 237 aa18.39■□□□□ 0.53
CHD9-220ENST00000569794 FARP1Q9Y4F1 1045 aaPredicted RBP18.3■□□□□ 0.52
CHD9-220ENST00000569794 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.52
CHD9-220ENST00000569794 GABBR2O75899 941 aa18.21■□□□□ 0.51
CHD9-220ENST00000569794 CD44P16070 742 aaKnown RBP18.17■□□□□ 0.5
CHD9-220ENST00000569794 CREBZFQ9NS37 354 aa18.17■□□□□ 0.5
CHD9-220ENST00000569794 PROM2Q8N271 834 aa17.98■□□□□ 0.47
CHD9-220ENST00000569794 CLCN6P51797 869 aa17.93■□□□□ 0.46
CHD9-220ENST00000569794 ZRANB1Q9UGI0 708 aa17.92■□□□□ 0.46
CHD9-220ENST00000569794 ZNF579Q8NAF0 562 aaKnown RBP17.91■□□□□ 0.46
CHD9-220ENST00000569794 MNX1P50219 401 aaPredicted RBP17.87■□□□□ 0.45
CHD9-220ENST00000569794 POTEIP0CG38 1075 aa17.84■□□□□ 0.45
CHD9-220ENST00000569794 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHD9-220ENST00000569794 PAK3O75914 559 aaPredicted RBP17.76■□□□□ 0.43
CHD9-220ENST00000569794 LHX8Q68G74 356 aa17.73■□□□□ 0.43
CHD9-220ENST00000569794 DCBLD2Q96PD2 775 aa17.71■□□□□ 0.43
CHD9-220ENST00000569794 GALR2O43603 387 aaPredicted RBP17.68■□□□□ 0.42
CHD9-220ENST00000569794 PHF12Q96QT6 1004 aa17.68■□□□□ 0.42
CHD9-220ENST00000569794 MIER1Q8N108 512 aa17.53■□□□□ 0.4
CHD9-220ENST00000569794 PLEKHG5O94827 1062 aa17.5■□□□□ 0.39
CHD9-220ENST00000569794 TSPYL2Q9H2G4 693 aaPredicted RBP17.49■□□□□ 0.39
CHD9-220ENST00000569794 FKBP8Q14318 412 aa17.48■□□□□ 0.39
CHD9-220ENST00000569794 MS4A3Q96HJ5 214 aa17.44■□□□□ 0.38
CHD9-220ENST00000569794 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
CHD9-220ENST00000569794 PLCD3Q8N3E9 789 aa17.4■□□□□ 0.38
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