RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SPAG6O75602 509 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 KIAA0754O94854 1291 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 HAUS5O94927 633 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 APOA4P06727 396 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 CTSBP07858 339 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 ERVK-10P10266 1014 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 FGF5P12034 268 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 PKMP14618 531 aaKnown RBP12.89□□□□□ -0.35
VEGFA-219ENST00000518824 PAMP19021 973 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 CDH3P22223 829 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 F8A1P23610 371 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 CASQ1P31415 396 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 PAFAH1B1P43034 410 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
VEGFA-219ENST00000518824 PGGT1BP53609 377 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 ETF1P62495 437 aaKnown RBP12.89□□□□□ -0.35
VEGFA-219ENST00000518824 TUBB3Q13509 450 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 GBX1Q14549 363 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 CRYMQ14894 314 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 ZIC1Q15915 447 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 HSP90AA5PQ58FG0 334 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 ACSBG2Q5FVE4 666 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 PWWP2BQ6NUJ5 590 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 HIBCHQ6NVY1 386 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-219ENST00000518824 SDCCAG8Q86SQ7 713 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-219ENST00000518824 TAX1BP1Q86VP1 789 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 D2HGDHQ8N465 521 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 LINC01555Q8NAE3 123 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 GALNT6Q8NCL4 622 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 SNRNP27Q8WVK2 155 aaKnown RBP12.89□□□□□ -0.35
VEGFA-219ENST00000518824 ASZ1Q8WWH4 475 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 OR2A14Q96R47 310 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 CD180Q99467 661 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 EBNA1BP2Q99848 306 aaKnown RBP12.89□□□□□ -0.35
VEGFA-219ENST00000518824 TWSG1Q9GZX9 223 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 FAM60AQ9NP50 221 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 IARS2Q9NSE4 1012 aaKnown RBP12.89□□□□□ -0.35
VEGFA-219ENST00000518824 IL17BQ9UHF5 180 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 SNX24Q9Y343 169 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 CCDC188H7C350 402 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 RAD51CO43502 376 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 SEC31AO94979 1220 aaKnown RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 ZBTB11O95625 1053 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 PRB1P04280 392 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 CHRM5P08912 532 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 UGT2B7P16662 529 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 GABRB3P28472 473 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 PKLRP30613 574 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 ELK3P41970 407 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 HSD11B2P80365 405 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 TIAL1Q01085 375 aaKnown RBP eCLIP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 PRKAA1Q13131 559 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 THOC5Q13769 683 aaKnown RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 FASTKD3Q14CZ7 662 aaKnown RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 KYNUQ16719 465 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 TRMT10BQ6PF06 316 aaKnown RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 OTOAQ7RTW8 1153 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 HOOK3Q86VS8 718 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 KCNMB4Q86W47 210 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 LRRC6Q86X45 466 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 RASGRP3Q8IV61 690 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 NLGN4XQ8N0W4 816 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 IL22RA1Q8N6P7 574 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 NLGN4YQ8NFZ3 816 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 TTC9Q92623 222 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 ZNF501Q96CX3 271 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 TRAPPC9Q96Q05 1148 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 TEFMQ96QE5 360 aaKnown RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 PANX3Q96QZ0 392 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 RUFY1Q96T51 708 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 TCF12Q99081 682 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 PITPNM3Q9BZ71 974 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 ULBP3Q9BZM4 244 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 C1GALT1Q9NS00 363 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 FGF21Q9NSA1 209 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 SOHLH2Q9NX45 425 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 FBXO5Q9UKT4 447 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 CHMP2BQ9UQN3 213 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 BTRCQ9Y297 605 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 KLHL20Q9Y2M5 609 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 PCDHB11Q9Y5F2 797 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 PCDHGA4Q9Y5G9 962 aa12.88□□□□□ -0.35
VEGFA-219ENST00000518824 MRPS18BQ9Y676 258 aaKnown RBP12.88□□□□□ -0.35
VEGFA-219ENST00000518824 PIPSLA2A3N6 862 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 C1orf105O95561 183 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 ESR1P03372 595 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 NTRK1P04629 796 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 PGAM1P18669 254 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 CHRM3P20309 590 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 SHMT2P34897 504 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 CLCN7P51798 805 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 UCNP55089 124 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 ADARP55265 1226 aaKnown RBP12.87□□□□□ -0.35
VEGFA-219ENST00000518824 PLOD1Q02809 727 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-219ENST00000518824 CUL1Q13616 776 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 MORF4L2Q15014 288 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 TRADDQ15628 312 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms