RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 UGT2B7P16662 529 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 MGAT1P26572 445 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 ARNTP27540 789 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 RAB28P51157 221 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 HSPA14Q0VDF9 509 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 GPS1Q13098 491 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 BRD3Q15059 726 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 TYSND1Q2T9J0 566 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-213ENST00000496347 ZNF517Q6ZMY9 492 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-213ENST00000496347 UNC5AQ6ZN44 842 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 HOOK3Q86VS8 718 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 OTUD6BQ8N6M0 293 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 C19orf47Q8N9M1 422 aaKnown RBP15.22■□□□□ 0.03
HDAC4-213ENST00000496347 LKAAEAR1Q8TD35 194 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 TRAPPC9Q96Q05 1148 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 P2RY12Q9H244 342 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 ACTL8Q9H568 366 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 XKR8Q9H6D3 395 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 XAB2Q9HCS7 855 aaKnown RBP15.22■□□□□ 0.03
HDAC4-213ENST00000496347 CDYLQ9Y232 598 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 POLHQ9Y253 713 aa15.22■□□□□ 0.03
HDAC4-213ENST00000496347 HEMK1Q9Y5R4 338 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-213ENST00000496347 MRPS18BQ9Y676 258 aaKnown RBP15.22■□□□□ 0.03
HDAC4-213ENST00000496347 KPNA5O15131 536 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 ZSCAN12O43309 604 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 NDUFS3O75489 264 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 CREG1O75629 220 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 NTRK1P04629 796 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 MLNP12872 115 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 PAMP19021 973 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 OGNP20774 298 aaKnown RBP15.21■□□□□ 0.03
HDAC4-213ENST00000496347 CYP2A7P20853 494 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 AOAHP28039 575 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 NMBRP28336 390 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 PKLRP30613 574 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 FNTAP49354 379 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 VPS41P49754 854 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 ABRQ12979 859 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 KIR2DS3Q14952 304 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 ZNF789Q5FWF6 425 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 IZUMO3Q5VZ72 239 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 PTRHD1Q6GMV3 140 aaKnown RBP15.21■□□□□ 0.03
HDAC4-213ENST00000496347 TTC27Q6P3X3 843 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 FBXO38Q6PIJ6 1188 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 NAPRTQ6XQN6 538 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 LDB1Q86U70 411 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-213ENST00000496347 GSDMBQ8TAX9 411 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 MAGOHBQ96A72 148 aaKnown RBP15.21■□□□□ 0.03
HDAC4-213ENST00000496347 RNF31Q96EP0 1072 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 MFSD3Q96ES6 412 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 RAB11FIP5Q9BXF6 653 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 SAMD15Q9P1V8 674 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 VPS9D1Q9Y2B5 631 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 TDRKHQ9Y2W6 561 aaKnown RBP15.21■□□□□ 0.03
HDAC4-213ENST00000496347 MRFAP1Q9Y605 127 aa15.21■□□□□ 0.03
HDAC4-213ENST00000496347 NBASA2RRP1 2371 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 A0A0J9YY10 115 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 TCRBV7S3A2A0A539 114 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 H3BMM5 538 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 J3QKU1 62 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 CES2O00748 559 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 SLC28A2O43868 658 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 KATNA1O75449 491 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 TMEM63AO94886 807 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 VAPBO95292 243 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 KRT14P02533 472 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 KLK3P07288 261 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-213ENST00000496347 PTPN4P29074 926 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 RORAP35398 523 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 CSE1LP55060 971 aaKnown RBP15.2■□□□□ 0.02
HDAC4-213ENST00000496347 ADARP55265 1226 aaKnown RBP15.2■□□□□ 0.02
HDAC4-213ENST00000496347 ITGA1P56199 1179 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 GPS2Q13227 327 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 TRIP13Q15645 432 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-213ENST00000496347 DEFB109BQ30KR1 87 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 ATP1A1-AS1Q5TC04 95 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 C16orf46Q6P387 395 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 OTOAQ7RTW8 1153 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 PRICKLE2Q7Z3G6 844 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 SDCCAG8Q86SQ7 713 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-213ENST00000496347 SYVN1Q86TM6 617 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 VRK3Q8IV63 474 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 MCUQ8NE86 351 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 OR1L3Q8NH93 324 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 FLVCR1-AS1Q8TAF5 88 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 ACTRT1Q8TDG2 376 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 GRK7Q8WTQ7 553 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 TCTN2Q96GX1 697 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 OR2A14Q96R47 310 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 TCF12Q99081 682 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 NRTNQ99748 197 aa15.2■□□□□ 0.02
HDAC4-213ENST00000496347 DPH2Q9BQC3 489 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-213ENST00000496347 IQCF5A8MTL0 148 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 E7EQ34 232 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 KIF5CO60282 957 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 PHF2O75151 1096 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 ESR1P03372 595 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 HBQ1P09105 142 aa15.19■□□□□ 0.02
HDAC4-213ENST00000496347 TPBGLP0DKB5 382 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms