RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 CTBP1Q13363 440 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 MAP7Q14244 749 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 CRYMQ14894 314 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 MORF4L2Q15014 288 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 KYNUQ16719 465 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 LONRF1Q17RB8 773 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL9A2-208ENST00000488463 PLEKHS1Q5SXH7 462 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 KIAA1614Q5VZ46 1190 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 ZNF470Q6ECI4 717 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 HIBCHQ6NVY1 386 aaPredicted RBP13.76□□□□□ -0.21
COL9A2-208ENST00000488463 UNC5DQ6UXZ4 953 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 CCDC81Q6ZN84 652 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 PCGF5Q86SE9 256 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 CACNA2D3Q8IZS8 1091 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 LINC01555Q8NAE3 123 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 SIDT2Q8NBJ9 832 aaKnown RBP13.76□□□□□ -0.21
COL9A2-208ENST00000488463 TTC9Q92623 222 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 STAMBPL1Q96FJ0 436 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 PANX3Q96QZ0 392 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 OR2A14Q96R47 310 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 SLC30A3Q99726 388 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 EBNA1BP2Q99848 306 aaKnown RBP13.76□□□□□ -0.21
COL9A2-208ENST00000488463 TSSK1BQ9BXA7 367 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 C1GALT1Q9NS00 363 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 INTS10Q9NVR2 710 aaKnown RBP13.76□□□□□ -0.21
COL9A2-208ENST00000488463 POLG2Q9UHN1 485 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 PLAGL1Q9UM63 463 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 PCDHB11Q9Y5F2 797 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 PCDHGA4Q9Y5G9 962 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 NFS1Q9Y697 457 aa13.76□□□□□ -0.21
COL9A2-208ENST00000488463 LOC101059948A0A1B0GTJ6 334 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 SLC9B1P1A6NJY1 282 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 TERTO14746 1132 aaKnown RBP13.75□□□□□ -0.21
COL9A2-208ENST00000488463 SPAG6O75602 509 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 APOA4P06727 396 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 MSL3P1P0C860 447 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 PKMP14618 531 aaKnown RBP13.75□□□□□ -0.21
COL9A2-208ENST00000488463 LIFP15018 202 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 PGAM1P18669 254 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 PKLRP30613 574 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 SHMT2P34897 504 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 SLC1A2P43004 574 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 CLCN7P51798 805 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 TIAL1Q01085 375 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL9A2-208ENST00000488463 ABRQ12979 859 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 TUBB3Q13509 450 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 MANEAQ5SRI9 462 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 PWWP2BQ6NUJ5 590 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 ARMC6Q6NXE6 501 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 RASGRP3Q8IV61 690 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 NLGN4XQ8N0W4 816 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 OTUD6BQ8N6M0 293 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 NLGN4YQ8NFZ3 816 aaPredicted RBP13.75□□□□□ -0.21
COL9A2-208ENST00000488463 GIMAP7Q8NHV1 300 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 ZNF501Q96CX3 271 aaPredicted RBP13.75□□□□□ -0.21
COL9A2-208ENST00000488463 RNF31Q96EP0 1072 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 TRAPPC9Q96Q05 1148 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 KRT12Q99456 494 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 FBXO6Q9NRD1 293 aaPredicted RBP13.75□□□□□ -0.21
COL9A2-208ENST00000488463 FGF21Q9NSA1 209 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 ACTR10Q9NZ32 417 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 OR6C2Q9NZP2 312 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 RUVBL2Q9Y230 463 aaKnown RBP13.75□□□□□ -0.21
COL9A2-208ENST00000488463 MAD1L1Q9Y6D9 718 aa13.75□□□□□ -0.21
COL9A2-208ENST00000488463 PRRC2CQ9Y520 2896 aaKnown RBP13.75□□□□□ -0.21
COL9A2-208ENST00000488463 GSAPA4D1B5 854 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 KRT87PA6NCN2 255 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 C2orf74A8MZ97 194 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 H3BMH7 237 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 H3BMM5 538 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 KPNA5O15131 536 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 PRICKLE3O43900 615 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-208ENST00000488463 MATN4O95460 622 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 C1orf105O95561 183 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 CHRM5P08912 532 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-208ENST00000488463 PVRP15151 417 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 UGT2B7P16662 529 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 F8A1P23610 371 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 MAP4P27816 1152 aaKnown RBP13.74□□□□□ -0.21
COL9A2-208ENST00000488463 GABRB3P28472 473 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 ATP5DP30049 168 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 STAT5AP42229 794 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 RPL21P46778 160 aaKnown RBP13.74□□□□□ -0.21
COL9A2-208ENST00000488463 GABRA4P48169 554 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 ITGA8P53708 1063 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 TUBB4BP68371 445 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 MRPS25P82663 173 aaKnown RBP13.74□□□□□ -0.21
COL9A2-208ENST00000488463 ABHD18Q0P651 414 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 PRKAA1Q13131 559 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 TUBB2AQ13885 445 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 TMED2Q15363 201 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 GPR19Q15760 415 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 ZIC1Q15915 447 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 CCSMST1Q4G0I0 132 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 HSP90AA5PQ58FG0 334 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 SPESP1Q6UW49 350 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 OTOAQ7RTW8 1153 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms