RNA–Protein interactions for RNA: ENST00000463574.1

HLA-B-251, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-251ENST00000463574 HSPA14Q0VDF9 509 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 RPA4Q13156 261 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 THOC5Q13769 683 aaKnown RBP12.18□□□□□ -0.46
HLA-B-251ENST00000463574 BBS9Q3SYG4 887 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 MSS51Q4VC12 460 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 CTSL3PQ5NE16 218 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 HP1BP3Q5SSJ5 553 aaPredicted RBP12.18□□□□□ -0.46
HLA-B-251ENST00000463574 CACHD1Q5VU97 1274 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 MRNIPQ6NTE8 343 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
HLA-B-251ENST00000463574 SDCCAG8Q86SQ7 713 aaPredicted RBP12.18□□□□□ -0.46
HLA-B-251ENST00000463574 HOOK3Q86VS8 718 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 OOSP2Q86WS3 158 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 VRK3Q8IV63 474 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 DENND6AQ8IWF6 608 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 OR52E1Q8NGJ3 308 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 OR5AR1Q8NGP9 310 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 APOBEC4Q8WW27 367 aaKnown RBP12.18□□□□□ -0.46
HLA-B-251ENST00000463574 STARD8Q92502 1023 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 FAM136AQ96C01 138 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 STAMBPL1Q96FJ0 436 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 ABHD17AQ96GS6 310 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 CARD6Q9BX69 1037 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 TSSK1BQ9BXA7 367 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 P2RY12Q9H244 342 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 TRIT1Q9H3H1 467 aaKnown RBP12.18□□□□□ -0.46
HLA-B-251ENST00000463574 HRASLS2Q9NWW9 162 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 GNPTGQ9UJJ9 305 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
HLA-B-251ENST00000463574 ASF1AQ9Y294 204 aa12.18□□□□□ -0.46
HLA-B-251ENST00000463574 TMEM184BQ9Y519 407 aaPredicted RBP12.18□□□□□ -0.46
HLA-B-251ENST00000463574 USP9YO00507 2555 aaPredicted RBP12.18□□□□□ -0.46
HLA-B-251ENST00000463574 MAGEB16A2A368 324 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 OR6C74A6NCV1 312 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 EFCAB8A8MWE9 144 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 BHMG1C9JSJ3 638 aaPredicted RBP12.17□□□□□ -0.46
HLA-B-251ENST00000463574 NIPSNAP2O75323 286 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 USP1O94782 785 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 POLR2CP19387 275 aaPredicted RBP12.17□□□□□ -0.46
HLA-B-251ENST00000463574 OGNP20774 298 aaKnown RBP12.17□□□□□ -0.46
HLA-B-251ENST00000463574 RPS3P23396 243 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■■■□□ 18.9
HLA-B-251ENST00000463574 ITGA8P53708 1063 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 FOXM1Q08050 763 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 CTBP1Q13363 440 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 TYSND1Q2T9J0 566 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 ZNF789Q5FWF6 425 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 DNTTIP2Q5QJE6 756 aaKnown RBP12.17□□□□□ -0.46
HLA-B-251ENST00000463574 ATP1A1-AS1Q5TC04 95 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 ZNF470Q6ECI4 717 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 NEPROQ6NW34 567 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 ARMC6Q6NXE6 501 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 KLHL35Q6PF15 583 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 FBXO38Q6PIJ6 1188 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 CENPUQ71F23 418 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 TMEM135Q86UB9 458 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 ACVR1CQ8NER5 493 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 SPATA4Q8NEY3 305 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 CFAP61Q8NHU2 1237 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 LCN9Q8WX39 176 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 LPGAT1Q92604 370 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 ZDHHC12Q96GR4 267 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 SNF8Q96H20 258 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 PANX3Q96QZ0 392 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 MAP3K3Q99759 626 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 XKR8Q9H6D3 395 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 MVB12BQ9H7P6 319 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 FBXO6Q9NRD1 293 aaPredicted RBP12.17□□□□□ -0.46
HLA-B-251ENST00000463574 C20orf96Q9NUD7 363 aaPredicted RBP12.17□□□□□ -0.46
HLA-B-251ENST00000463574 PLAGL1Q9UM63 463 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 TDRKHQ9Y2W6 561 aaKnown RBP12.17□□□□□ -0.46
HLA-B-251ENST00000463574 SNX24Q9Y343 169 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 FER1L5A0AVI2 2057 aa12.17□□□□□ -0.46
HLA-B-251ENST00000463574 GSAPA4D1B5 854 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 PFDN6O15212 129 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 NTRK1P04629 796 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 APOA4P06727 396 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 ANKRD34CP0C6C1 535 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 PGAM1P18669 254 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 AOAHP28039 575 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 ACADLP28330 430 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 STAT5AP42229 794 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 RPL21P46778 160 aaKnown RBP12.16□□□□□ -0.46
HLA-B-251ENST00000463574 SH3BP2P78314 561 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 MPP1Q00013 466 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 ABRQ12979 859 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 PRKAA1Q13131 559 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 MORF4L2Q15014 288 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 TMED2Q15363 201 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 LONRF1Q17RB8 773 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 LACTB2Q53H82 288 aaPredicted RBP12.16□□□□□ -0.46
HLA-B-251ENST00000463574 RNF187Q5TA31 235 aaPredicted RBP12.16□□□□□ -0.46
HLA-B-251ENST00000463574 ARMC3Q5W041 872 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 HIBCHQ6NVY1 386 aaPredicted RBP12.16□□□□□ -0.46
HLA-B-251ENST00000463574 PRSS42Q7Z5A4 293 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 LRRC6Q86X45 466 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 CILP2Q8IUL8 1156 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 IGDCC3Q8IVU1 814 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 SLC22A15Q8IZD6 547 aa12.16□□□□□ -0.46
HLA-B-251ENST00000463574 ESX1Q8N693 406 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms