RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 KCNMB2Q9Y691 235 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 MAP3K7O43318 606 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 KATNA1O75449 491 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 CHRM5P08912 532 aaPredicted RBP18.76■□□□□ 0.59
USP40-207ENST00000450940 FURINP09958 794 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 RPS3P23396 243 aaKnown RBP eCLIP18.76■□□□□ 0.59
USP40-207ENST00000450940 MGAT1P26572 445 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 ARNTP27540 789 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 ABRQ12979 859 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 GPS2Q13227 327 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 CYP1B1Q16678 543 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 TTC27Q6P3X3 843 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 FAM199XQ6PEV8 388 aaPredicted RBP18.76■□□□□ 0.59
USP40-207ENST00000450940 LRRC6Q86X45 466 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 VRK3Q8IV63 474 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 REXO1L1PQ8IX06 675 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 OR1L3Q8NH93 324 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 CPT1BQ92523 772 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 MENTQ9BUN1 341 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 SYBUQ9NX95 663 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 SPHK1Q9NYA1 384 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 SOX13Q9UN79 622 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 NEU2Q9Y3R4 380 aa18.76■□□□□ 0.59
USP40-207ENST00000450940 IQCF5A8MTL0 148 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 SUV39H1O43463 412 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 KDM1AO60341 852 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 APOA4P06727 396 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 PVRP15151 417 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 UGT2B7P16662 529 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 PTPN4P29074 926 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 RORAP35398 523 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 HSPA14Q0VDF9 509 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 ERV3-1Q14264 604 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 KYNUQ16719 465 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 PLEKHS1Q5SXH7 462 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 IZUMO3Q5VZ72 239 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 UNC5DQ6UXZ4 953 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 CDHR3Q6ZTQ4 885 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 DSELQ8IZU8 1212 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 SEC14L1Q92503 715 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 MFSD3Q96ES6 412 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 MS4A14Q96JA4 679 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 ACTL8Q9H568 366 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 SERTAD3Q9UJW9 196 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 POLHQ9Y253 713 aa18.75■□□□□ 0.59
USP40-207ENST00000450940 TDRKHQ9Y2W6 561 aaKnown RBP18.75■□□□□ 0.59
USP40-207ENST00000450940 TMEM150CB9EJG8 249 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 MEN1O00255 615 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 KPNA5O15131 536 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 SLC28A2O43868 658 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 VAPBO95292 243 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 KRT14P02533 472 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 KLK3P07288 261 aaPredicted RBP18.74■□□□□ 0.59
USP40-207ENST00000450940 GABRA4P48169 554 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 SARNPP82979 210 aaKnown RBP18.74■□□□□ 0.59
USP40-207ENST00000450940 GPS1Q13098 491 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 GRB7Q14451 532 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 KIR2DS3Q14952 304 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 TRIP13Q15645 432 aaPredicted RBP18.74■□□□□ 0.59
USP40-207ENST00000450940 SLC5A12Q1EHB4 618 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 PRAMEF17Q5VTA0 474 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 CAND1Q86VP6 1230 aaKnown RBP18.74■□□□□ 0.59
USP40-207ENST00000450940 KRT222Q8N1A0 295 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 MAGOHBQ96A72 148 aaKnown RBP18.74■□□□□ 0.59
USP40-207ENST00000450940 TCTN2Q96GX1 697 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 PANX3Q96QZ0 392 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 RUFY1Q96T51 708 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 TCF12Q99081 682 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 GRPEL1Q9HAV7 217 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 FAM60AQ9NP50 221 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 GNPTGQ9UJJ9 305 aa18.74■□□□□ 0.59
USP40-207ENST00000450940 FARSAQ9Y285 508 aaKnown RBP18.74■□□□□ 0.59
USP40-207ENST00000450940 HEMK1Q9Y5R4 338 aaPredicted RBP18.74■□□□□ 0.59
USP40-207ENST00000450940 H3BMH7 237 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 NDUFS3O75489 264 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 RPN2P04844 631 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 RAB40ALP0C0E4 278 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 MLNP12872 115 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 PEBP1P30086 187 aaKnown RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 PKLRP30613 574 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 COILP38432 576 aaPredicted RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 RAB28P51157 221 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 CSE1LP55060 971 aaKnown RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 ADARP55265 1226 aaKnown RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 RPS15P62841 145 aaKnown RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 ZIC1Q15915 447 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 UGT8Q16880 541 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 KCTD19Q17RG1 926 aaPredicted RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 TYSND1Q2T9J0 566 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 PTRHD1Q6GMV3 140 aaKnown RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 KIAA0930Q6ICG6 404 aaPredicted RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 MRNIPQ6NTE8 343 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 SYVN1Q86TM6 617 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 C19orf47Q8N9M1 422 aaKnown RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 MCUQ8NE86 351 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 MR1Q95460 341 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 BIRC8Q96P09 236 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 NAP1L3Q99457 506 aaPredicted RBP18.73■□□□□ 0.59
USP40-207ENST00000450940 KLHL25Q9H0H3 589 aa18.73■□□□□ 0.59
USP40-207ENST00000450940 CHST8Q9H2A9 424 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms