RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 CCR10P46092 362 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 TXNDC8Q6A555 127 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 ZNF783Q6ZMS7 281 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 HIPK1Q86Z02 1210 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 ZMIZ2Q8NF64 920 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 RCN3Q96D15 328 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 EBPLQ9BY08 206 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 CIDEBQ9UHD4 219 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 MRPS7Q9Y2R9 242 aaKnown RBP11.03□□□□□ -0.64
FN1-211ENST00000443816 PCDHGB7Q9Y5F8 929 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 LAMB1P07942 1786 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 PRORSD1PA6NEY8 169 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 ENO4A6NNW6 628 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 GSC2O15499 205 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 RGS20O76081 388 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 FABP3P05413 133 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 SLC10A3P09131 477 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 ZNF347Q96SE7 839 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 SUSD2Q9UGT4 822 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 WNT6Q9Y6F9 365 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 NINQ8N4C6 2090 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 DNASE1L1P49184 302 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 PPIDQ08752 370 aaKnown RBP11.02□□□□□ -0.64
FN1-211ENST00000443816 MLIPQ5VWP3 458 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 SAPCD2Q86UD0 394 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 OR5T3Q8NGG3 340 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 CD248Q9HCU0 757 aa11.02□□□□□ -0.64
FN1-211ENST00000443816 MYO5AQ9Y4I1 1855 aaKnown RBP11.02□□□□□ -0.64
FN1-211ENST00000443816 CCDC182A6NF36 153 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 MAGEB17A8MXT2 336 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 IQCF3P0C7M6 154 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 SLC11A1P49279 550 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 FIP1L1Q6UN15 594 aaKnown RBP11.02□□□□□ -0.65
FN1-211ENST00000443816 PPM1MQ96MI6 270 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 PCDHB18PQ96TA0 734 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 SDCBP2Q9H190 292 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 CCSER2Q9H7U1 834 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 NKIRAS2Q9NYR9 191 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 HAT1O14929 419 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 PER3P56645 1201 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 HKDC1Q2TB90 917 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 WDR60Q8WVS4 1066 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 TUBGCP5Q96RT8 1024 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 USP29Q9HBJ7 922 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 ING3Q9NXR8 418 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 IFT80Q9P2H3 777 aaPredicted RBP11.02□□□□□ -0.65
FN1-211ENST00000443816 LEFTY2O00292 366 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 SNX4O95219 450 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 GMFBP60983 142 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 DPY19L1Q2PZI1 675 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 SLC8B1Q6J4K2 584 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 CCDC80Q76M96 950 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 BADQ92934 168 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 NPAS2Q99743 824 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 SLC35C2Q9NQQ7 365 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 ZMPSTE24O75844 475 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 TBX18O95935 607 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 SERPINA3P01011 423 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 GJA1P17302 382 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 ATXN1P54253 815 aaKnown RBP11.02□□□□□ -0.65
FN1-211ENST00000443816 SELENOVP59797 346 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 RIPK1Q13546 671 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 PRKD1Q15139 912 aaPredicted RBP11.02□□□□□ -0.65
FN1-211ENST00000443816 SLC39A5Q6ZMH5 540 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 Q6ZVU0 165 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 SYVN1Q86TM6 617 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 C12orf40Q86WS4 652 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 OR2L5Q8NG80 312 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 CMTM7Q96FZ5 175 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 FCRL5Q96RD9 977 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 GABRQQ9UN88 632 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 H3BUI4 141 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 NPC1O15118 1278 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 KDELR3O43731 214 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 HCN1O60741 890 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 CLEC3AO75596 197 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 LYPLA1O75608 230 aaPredicted RBP11.02□□□□□ -0.65
FN1-211ENST00000443816 PSMG1O95456 288 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 FOSL2P15408 326 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 AHCYP23526 432 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 NFKB2Q00653 900 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 DPYSQ14117 519 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 EML3Q32P44 896 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 TIGD2Q4W5G0 525 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 NUDT13Q86X67 352 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 PXYLP1Q8TE99 480 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 AK5Q9Y6K8 562 aa11.02□□□□□ -0.65
FN1-211ENST00000443816 ELOA3DA6NLF2 546 aaPredicted RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 SCAMP1O15126 338 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 EPHB6O15197 1021 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 SSNA1O43805 119 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CXCR1P25024 350 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 ELOA3BQ3SY89 546 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CDCA2Q69YH5 1023 aaPredicted RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 FSTL4Q6MZW2 842 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CROCCP3Q8IVE0 287 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 ELOA3Q8NG57 546 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 OR4K17Q8NGC6 315 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 GPC6Q9Y625 555 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms