RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 C11orf21Q9P2W6 132 aa4.81□□□□□ -1.64
CNOT1-209ENST00000566240 ITGA11Q9UKX5 1188 aa4.81□□□□□ -1.64
CNOT1-209ENST00000566240 MYO6Q9UM54 1294 aa4.81□□□□□ -1.64
CNOT1-209ENST00000566240 SPIN1Q9Y657 262 aaPredicted RBP4.81□□□□□ -1.64
CNOT1-209ENST00000566240 CKAP5Q14008 2032 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 ZCWPW2A0A1B0GU75 182 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 HYKKA2RU49 373 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 ZNHIT1O43257 154 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 LINC00271P0C7V0 271 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 FAM106CPP0CH98 169 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 PTMSP20962 102 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 ARRB2P32121 409 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 SOAT1P35610 550 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 NR4A2P43354 598 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 KCNJ1P48048 391 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 SLC20A2Q08357 652 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 AP1B1Q10567 949 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 ITGA7Q13683 1181 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 RCN2Q14257 317 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 NFATC4Q14934 902 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 CCDC92Q53HC0 331 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-209ENST00000566240 MDH1BQ5I0G3 518 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 TCTE1Q5JU00 501 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 C11orf87Q6NUJ2 197 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 ENPP7Q6UWV6 458 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 TMEM182Q6ZP80 229 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-209ENST00000566240 PLEKHM3Q6ZWE6 761 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 ZSCAN30Q86W11 494 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 COMMD2Q86X83 199 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 DNAJC10Q8IXB1 793 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 ODF3L1Q8IXM7 274 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 SMRP1Q8NCR6 262 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 SSMEM1Q8WWF3 244 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 RAD54LQ92698 747 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 KRT35Q92764 455 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 SNX21Q969T3 373 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 MIB2Q96AX9 1013 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 TMEM19Q96HH6 336 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 CABS1Q96KC9 395 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 TMEM206Q9H813 350 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 MINDY3Q9H8M7 445 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 CDH20Q9HBT6 801 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 Q9N2K0 584 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 ZNF224Q9NZL3 707 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 VPS18Q9P253 973 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 KCNS2Q9ULS6 477 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 OR2W1Q9Y3N9 320 aa4.8□□□□□ -1.64
CNOT1-209ENST00000566240 ABCC9O60706 1549 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 IGLV5-37A0A075B6J1 123 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 MED19A0JLT2 244 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-209ENST00000566240 SLC33A1O00400 549 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-209ENST00000566240 EIF3DO15371 548 aaKnown RBP eCLIP4.79□□□□□ -1.64
CNOT1-209ENST00000566240 WDR1O75083 606 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 LDB3O75112 727 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 TOMM40O96008 361 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 CRYABP02511 175 aaKnown RBP4.79□□□□□ -1.64
CNOT1-209ENST00000566240 RLN1P04808 185 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 PRSS2P07478 247 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 CSN3P07498 182 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 KRT19P08727 400 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 SAGP10523 405 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-209ENST00000566240 EEF2P13639 858 aaKnown RBP4.79□□□□□ -1.64
CNOT1-209ENST00000566240 GM2AP17900 193 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 GTF2H2Q13888 395 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 HLFQ16534 295 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 CDO1Q16878 200 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 C2orf76Q3KRA6 126 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 LRRC73Q5JTD7 316 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 CCDC158Q5M9N0 1113 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 GTF2H2CQ6P1K8 395 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 SLC27A1Q6PCB7 646 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 GFRALQ6UXV0 394 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 ASB18Q6ZVZ8 466 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 NUP54Q7Z3B4 507 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 PTOV1Q86YD1 416 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 ARHGAP24Q8N264 748 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 RBMXL3Q8N7X1 1067 aaKnown RBP4.79□□□□□ -1.64
CNOT1-209ENST00000566240 UXS1Q8NBZ7 420 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 PPFIBP2Q8ND30 876 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 RDM1Q8NG50 284 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 CDCA5Q96FF9 252 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 BSCL2Q96G97 398 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-209ENST00000566240 OXNAD1Q96HP4 312 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-209ENST00000566240 SPATA33Q96N06 139 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 TUFT1Q9NNX1 390 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 ACKR4Q9NPB9 350 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 OCIAD1Q9NX40 245 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 B3GAT1Q9P2W7 334 aa4.79□□□□□ -1.64
CNOT1-209ENST00000566240 GPRASP1Q5JY77 1395 aa4.78□□□□□ -1.64
CNOT1-209ENST00000566240 TEX13DA0A0J9YY54 714 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-209ENST00000566240 FAM90A10PA6NDY2 464 aa4.78□□□□□ -1.64
CNOT1-209ENST00000566240 KINO60870 393 aaKnown RBP4.78□□□□□ -1.64
CNOT1-209ENST00000566240 PMS2P2O95744 297 aa4.78□□□□□ -1.64
CNOT1-209ENST00000566240 WDPCPO95876 746 aa4.78□□□□□ -1.64
CNOT1-209ENST00000566240 MT-ND3P03897 115 aa4.78□□□□□ -1.64
CNOT1-209ENST00000566240 TFAP2AP05549 437 aa4.78□□□□□ -1.64
CNOT1-209ENST00000566240 H1F0P07305 194 aaKnown RBP4.78□□□□□ -1.64
CNOT1-209ENST00000566240 SMIM18P0DKX4 95 aa4.78□□□□□ -1.64
CNOT1-209ENST00000566240 CSF2RAP15509 400 aa4.78□□□□□ -1.64
CNOT1-209ENST00000566240 ITGA2P17301 1181 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms