RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 MFSD3Q96ES6 412 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 PPM1MQ96MI6 270 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 TSSK1BQ9BXA7 367 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 ASF1AQ9Y294 204 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 RPS6KL1Q9Y6S9 549 aa21.11■□□□□ 0.97
COL9A3-211ENST00000477612 TIAF1O95411 115 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 TPBGLP0DKB5 382 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 MLNP12872 115 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 ARCN1P48444 511 aaKnown RBP21.1■□□□□ 0.97
COL9A3-211ENST00000477612 ARL4DP49703 201 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 TUBB4BP68371 445 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 CYP4F2P78329 520 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 PRKG2Q13237 762 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 TUBB2AQ13885 445 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 BRD3Q15059 726 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 TBR1Q16650 682 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 KCTD19Q17RG1 926 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-211ENST00000477612 PWWP2BQ6NUJ5 590 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 NAPRTQ6XQN6 538 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 LDB1Q86U70 411 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-211ENST00000477612 LRRC6Q86X45 466 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 EXD3Q8N9H8 876 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 GALNT6Q8NCL4 622 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 MCUQ8NE86 351 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 ASZ1Q8WWH4 475 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 CPT1BQ92523 772 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 EXTL1Q92935 676 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 PDLIM2Q96JY6 352 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 NRTNQ99748 197 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 HGH1Q9BTY7 390 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 TUBB2BQ9BVA1 445 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 SYTL2Q9HCH5 934 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 LATS2Q9NRM7 1088 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 SNX12Q9UMY4 172 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 ICKQ9UPZ9 632 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 SEC16AO15027 2179 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 BSNQ9UPA5 3926 aa21.1■□□□□ 0.97
COL9A3-211ENST00000477612 C2orf74A8MZ97 194 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 SLCO2B1O94956 709 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 CDH3P22223 829 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 AOAHP28039 575 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 FNTAP49354 379 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 DNAJC21Q5F1R6 531 aaKnown RBP21.09■□□□□ 0.97
COL9A3-211ENST00000477612 TMTC4Q5T4D3 741 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 ANKRD22Q5VYY1 191 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 UNC5BQ8IZJ1 945 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 LKAAEAR1Q8TD35 194 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 ELMO2Q96JJ3 720 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 CATSPER2Q96P56 530 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 KCND1Q9NSA2 647 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 IL17BQ9UHF5 180 aa21.09■□□□□ 0.97
COL9A3-211ENST00000477612 MAGEB16A2A368 324 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 SLC9B1P1A6NJY1 282 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 IQCF5A8MTL0 148 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 KIF5CO60282 957 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 PHF2O75151 1096 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 TMEM63AO94886 807 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 SHMT2P34897 504 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 VPS41P49754 854 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 TYSND1Q2T9J0 566 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 SYTL3Q4VX76 610 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 KIAA0930Q6ICG6 404 aaPredicted RBP21.08■□□□□ 0.97
COL9A3-211ENST00000477612 FBXO38Q6PIJ6 1188 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 UNC5AQ6ZN44 842 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 STAMBPL1Q96FJ0 436 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 TRAPPC9Q96Q05 1148 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 PANX3Q96QZ0 392 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 TCF12Q99081 682 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 LHX9Q9NQ69 397 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 TRMT1Q9NXH9 659 aaKnown RBP21.08■□□□□ 0.97
COL9A3-211ENST00000477612 ACTR10Q9NZ32 417 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 OR6C2Q9NZP2 312 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 LNPEPQ9UIQ6 1025 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 PADI1Q9ULC6 663 aa21.08■□□□□ 0.97
COL9A3-211ENST00000477612 GSAPA4D1B5 854 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 AVILO75366 819 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 VAPBO95292 243 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 RECKO95980 971 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 CCNYL3P0C7X3 344 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 ST6GAL1P15907 406 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 ITGB6P18564 788 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 F8A1P23610 371 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 MAGEA3P43357 314 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 ADARP55265 1226 aaKnown RBP21.07■□□□□ 0.96
COL9A3-211ENST00000477612 MC1RQ01726 317 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 HSPA14Q0VDF9 509 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 CES3Q6UWW8 571 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 VRK3Q8IV63 474 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 FLVCR1-AS1Q8TAF5 88 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 GRK7Q8WTQ7 553 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 CHRNA10Q9GZZ6 450 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 XKR8Q9H6D3 395 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 XAB2Q9HCS7 855 aaKnown RBP21.07■□□□□ 0.96
COL9A3-211ENST00000477612 GNPTGQ9UJJ9 305 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 PCDHGA6Q9Y5G7 932 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 PCM1Q15154 2024 aa21.07■□□□□ 0.96
COL9A3-211ENST00000477612 FAM237BA0A1B0GVD1 139 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 PIPSLA2A3N6 862 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 KPNA5O15131 536 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 NKX2-8O15522 239 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms