RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 BCLAF3A2AJT9 711 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 AIPO00170 330 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 IL1BP01584 269 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 FAM86B2P0C5J1 330 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 HTR2AP28223 471 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 HPCAL1P37235 193 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 MAGEB1P43366 347 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 ALDH3A2P51648 485 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 CDH8P55286 799 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 FGFBP1Q14512 234 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 FBXO42Q6P3S6 717 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 CES3Q6UWW8 571 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 VSTM1Q6UX27 236 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 BEND4Q6ZU67 534 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 GALNT13Q8IUC8 556 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 ARL6IP6Q8N6S5 226 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 PANX3Q96QZ0 392 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 GANQ9H2C0 597 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 POMPQ9Y244 141 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 STRCQ7RTU9 1775 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 FOXO6A8MYZ6 492 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 HMGCRP04035 888 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 HIST1H2ABP04908 130 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 CBR1P16152 277 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 ERVK-21P61565 698 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 MC2RQ01718 297 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 MERTKQ12866 999 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 CMPK2Q5EBM0 449 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 HIST3H2AQ7L7L0 130 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 IGFN1Q86VF2 1251 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 KCNMB4Q86W47 210 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 SPPL2CQ8IUH8 684 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 METTL25Q8N6Q8 603 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 OR10G6Q8NH81 332 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 NKX2-3Q8TAU0 364 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 HIST1H2ACQ93077 130 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 C1GALT1C1Q96EU7 318 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 KLHL5Q96PQ7 755 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 NCKIPSDQ9NZQ3 722 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 C14orf166Q9Y224 244 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 GSAPA4D1B5 854 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 C1QTNF3-AMACRE9PGA6 284 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 PGRMC2O15173 223 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 OR10H2O60403 315 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 TBL1XO60907 577 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 AVILO75366 819 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 TXNDC12O95881 172 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 PDGFAP04085 211 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 MGAT1P26572 445 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 ATP5C1P36542 298 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 CDK18Q07002 472 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 PLPP4Q5VZY2 271 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 PEG10Q86TG7 708 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 PARGQ86W56 976 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 DENND1CQ8IV53 801 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 PDZD9Q8IXQ8 264 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 DEFB106AQ8N104 65 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 BRSK1Q8TDC3 778 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 PRICKLE1Q96MT3 831 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 FAM83DQ9H4H8 585 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 MID1IP1Q9NPA3 183 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 TAS2R13Q9NYV9 303 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 MARCH2Q9P0N8 246 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 IFT80Q9P2H3 777 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 PCDHGA1Q9Y5H4 931 aa6.87□□□□□ -1.31
TGFBR3-210ENST00000533089 POLR1CO15160 346 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 PRKCGP05129 697 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ITGA2P17301 1181 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 RAB3AP20336 220 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 PAICSP22234 425 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 TUBG1P23258 451 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CFL1P23528 166 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CHMP24386 653 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 NTSP30990 170 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 RORCP51449 518 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CDH17Q12864 832 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 FRG1Q14331 258 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNHIT3Q15649 155 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF404Q494X3 552 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ESCO2Q56NI9 601 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF470Q6ECI4 717 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 FAM180BQ6P0A1 224 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF598Q86UK7 904 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 PSD4Q8NDX1 1056 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 C7orf26Q96N11 449 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 ARL15Q9NXU5 204 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 UGT2B11O75310 529 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CTDNEP1O95476 244 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 LGALS2P05162 132 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 MPOP05164 745 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 HDCP19113 662 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 CD6P30203 668 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 SERPINF1P36955 418 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 NKX6-1P78426 367 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 PRKCZQ05513 592 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 FSTL1Q12841 308 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 MAD2L1Q13257 205 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 EML3Q32P44 896 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 MINDY4Q4G0A6 757 aa6.86□□□□□ -1.31
TGFBR3-210ENST00000533089 COMTD1Q86VU5 262 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms