RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 EXTL1Q92935 676 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 SGSM3Q96HU1 749 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 NRTNQ99748 197 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 CATSPERZQ9NTU4 200 aa32.3■■■□□ 2.76
CBX4-203ENST00000494546 LOC101059948A0A1B0GTJ6 334 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 TCRBV7S3A2A0A539 114 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 F8W8V4 182 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 ZSCAN12O43309 604 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 KIAA0754O94854 1291 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 EBLN1P0CF75 366 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 ITGB6P18564 788 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 TPSB2P20231 275 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 MGAT1P26572 445 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 ABHD18Q0P651 414 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 C19orf57Q0VDD7 668 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 GPS1Q13098 491 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 TPSAB1Q15661 275 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 AARS2Q5JTZ9 985 aaKnown RBP32.29■■■□□ 2.76
CBX4-203ENST00000494546 TTC27Q6P3X3 843 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 FBXO38Q6PIJ6 1188 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 PPM1MQ96MI6 270 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 SLC12A9Q9BXP2 914 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 LNPEPQ9UIQ6 1025 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 RARRES3Q9UL19 164 aa32.29■■■□□ 2.76
CBX4-203ENST00000494546 GSAPA4D1B5 854 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 SPAG6O75602 509 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 KRT14P02533 472 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 NMBRP28336 390 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 HSD11B2P80365 405 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 CDK16Q00536 496 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 MAP7Q14244 749 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 LRRC8BQ6P9F7 803 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 C6orf15Q6UXA7 325 aaPredicted RBP32.28■■■□□ 2.76
CBX4-203ENST00000494546 GALNT6Q8NCL4 622 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 KCNF1Q9H3M0 494 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 TFB2MQ9H5Q4 396 aaKnown RBP32.28■■■□□ 2.76
CBX4-203ENST00000494546 XKR8Q9H6D3 395 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 TREX1Q9NSU2 369 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 SYBUQ9NX95 663 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 TRMT1Q9NXH9 659 aaKnown RBP32.28■■■□□ 2.76
CBX4-203ENST00000494546 MARCH4Q9P2E8 410 aaPredicted RBP32.28■■■□□ 2.76
CBX4-203ENST00000494546 ASF1AQ9Y294 204 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 PIKFYVEQ9Y2I7 2098 aa32.28■■■□□ 2.76
CBX4-203ENST00000494546 SLC5A10A0PJK1 596 aa32.27■■■□□ 2.76
CBX4-203ENST00000494546 ITGB2P05107 769 aa32.27■■■□□ 2.76
CBX4-203ENST00000494546 CSE1LP55060 971 aaKnown RBP32.27■■■□□ 2.76
CBX4-203ENST00000494546 ACY1Q03154 408 aa32.27■■■□□ 2.76
CBX4-203ENST00000494546 LARP7Q4G0J3 582 aaKnown RBP eCLIP32.27■■■□□ 2.76
CBX4-203ENST00000494546 STAMBPL1Q96FJ0 436 aa32.27■■■□□ 2.76
CBX4-203ENST00000494546 NAP1L3Q99457 506 aaPredicted RBP32.27■■■□□ 2.76
CBX4-203ENST00000494546 ARHGAP9Q9BRR9 750 aa32.27■■■□□ 2.76
CBX4-203ENST00000494546 SEMA4CQ9C0C4 833 aa32.27■■■□□ 2.76
CBX4-203ENST00000494546 SOHLH2Q9NX45 425 aa32.27■■■□□ 2.76
CBX4-203ENST00000494546 POMT2Q9UKY4 750 aa32.27■■■□□ 2.76
CBX4-203ENST00000494546 SMG1Q96Q15 3661 aaKnown RBP32.27■■■□□ 2.76
CBX4-203ENST00000494546 MATN2O00339 956 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 BTN3A3O00478 584 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 CD3EAPO15446 510 aaKnown RBP32.26■■■□□ 2.75
CBX4-203ENST00000494546 ZBTB11O95625 1053 aaPredicted RBP32.26■■■□□ 2.75
CBX4-203ENST00000494546 CDH3P22223 829 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 STAT5AP42229 794 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 PLOD1Q02809 727 aaPredicted RBP32.26■■■□□ 2.75
CBX4-203ENST00000494546 LINC00303Q3SY05 128 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 AMIGO1Q86WK6 493 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 D2HGDHQ8N465 521 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 OR5AR1Q8NGP9 310 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 EFHD1Q9BUP0 239 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 FGF21Q9NSA1 209 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 RPS6KL1Q9Y6S9 549 aa32.26■■■□□ 2.75
CBX4-203ENST00000494546 ATMQ13315 3056 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP32.25■■■□□ 2.75
CBX4-203ENST00000494546 BHMG1C9JSJ3 638 aaPredicted RBP32.25■■■□□ 2.75
CBX4-203ENST00000494546 PGRMC1O00264 195 aaKnown RBP32.25■■■□□ 2.75
CBX4-203ENST00000494546 BTN3A1O00481 513 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 ACADLP28330 430 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 TTPAP49638 278 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 KCNJ11Q14654 390 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 TBR1Q16650 682 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 CES3Q6UWW8 571 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 CARFQ8N187 725 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 ZNF843Q8N446 348 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 OTUD6BQ8N6M0 293 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 COG1Q8WTW3 980 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 SLC45A3Q96JT2 553 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 OSBPL9Q96SU4 736 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 TSSK1BQ9BXA7 367 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 IL17BQ9UHF5 180 aa32.25■■■□□ 2.75
CBX4-203ENST00000494546 ZNF891A8MT65 544 aaPredicted RBP32.24■■■□□ 2.75
CBX4-203ENST00000494546 IQCF5A8MTL0 148 aa32.24■■■□□ 2.75
CBX4-203ENST00000494546 TIAF1O95411 115 aa32.24■■■□□ 2.75
CBX4-203ENST00000494546 COILP38432 576 aaPredicted RBP32.24■■■□□ 2.75
CBX4-203ENST00000494546 SARNPP82979 210 aaKnown RBP32.24■■■□□ 2.75
CBX4-203ENST00000494546 TMTC4Q5T4D3 741 aa32.24■■■□□ 2.75
CBX4-203ENST00000494546 CCDC137Q6PK04 289 aaKnown RBP32.24■■■□□ 2.75
CBX4-203ENST00000494546 MFSD3Q96ES6 412 aa32.24■■■□□ 2.75
CBX4-203ENST00000494546 KIFC1Q9BW19 673 aa32.24■■■□□ 2.75
CBX4-203ENST00000494546 SLC9B1P1A6NJY1 282 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 KIF5CO60282 957 aa32.23■■■□□ 2.75
CBX4-203ENST00000494546 PRDX3P30048 256 aaKnown RBP32.23■■■□□ 2.75
CBX4-203ENST00000494546 CCR7P32248 378 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms