RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 LRIG2O94898 1065 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 KCNMA1Q12791 1236 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 ZIK1Q3SY52 487 aaPredicted RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 TXNDC11Q6PKC3 985 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 POLNQ7Z5Q5 900 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 NLGN4XQ8N0W4 816 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 FTMTQ8N4E7 242 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 FAM110BQ8TC76 370 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 PNPT1Q8TCS8 783 aaKnown RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 RFKQ969G6 155 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 SLC38A4Q969I6 547 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 AGO4Q9HCK5 861 aaKnown RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 KBTBD4Q9NVX7 518 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 LEF1Q9UJU2 399 aaPredicted RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 LOC102723532A0A0G2JNH3 316 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 F8VZ95 297 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 ARG2P78540 354 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 NR1I3Q14994 352 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 LINGO2Q7L985 606 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 SLC44A3Q8N4M1 653 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 EIF1ADQ8N9N8 165 aaKnown RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 ZNF473Q8WTR7 871 aaKnown RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 OR1F2PQ96R84 312 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 HERPUD2Q9BSE4 406 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 SNTG1Q9NSN8 517 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 SNX12Q9UMY4 172 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 MYRFQ9Y2G1 1151 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 PRMT5O14744 637 aaPredicted RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 SNCGO76070 127 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 PRAMEF12O95522 483 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 CYP4B1P13584 511 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 NAE1Q13564 534 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 OR6Y1Q8NGX8 325 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 WNT8BQ93098 351 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 COPS4Q9BT78 406 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 BTRCQ9Y297 605 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 AP4B1Q9Y6B7 739 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 F8VP50 259 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 TP53P04637 393 aaPredicted RBP12.47□□□□□ -0.41
TCF4-248ENST00000616053 FAM86B2P0C5J1 330 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 CARD16Q5EG05 197 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 ZNF311Q5JNZ3 666 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 AGBL2Q5U5Z8 902 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 ZNF398Q8TD17 642 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 TMEM74Q96NL1 305 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 NGBQ9NPG2 151 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 HAO1Q9UJM8 370 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 PCDHGB7Q9Y5F8 929 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 CACNA1FO60840 1977 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 PIP5K1BO14986 540 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 MID1O15344 667 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 PLA2G16P53816 162 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 E2F2Q14209 437 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 GARNL3Q5VVW2 1013 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 SYNPOQ8N3V7 929 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 GALNT11Q8NCW6 608 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 OR7G1Q8NGA0 311 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 TBCBQ99426 244 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 NDNQ99608 321 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 ITSN2Q9NZM3 1697 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 SEC24AO95486 1093 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 UROSP10746 265 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 MAXP61244 160 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 DYRK1AQ13627 763 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 SMIM15Q7Z3B0 74 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 UBQLNLQ8IYU4 475 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 PARP8Q8N3A8 854 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 OR8S1Q8NH09 359 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 RAB11FIP5Q9BXF6 653 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 CUEDC1Q9NWM3 386 aaPredicted RBP12.47□□□□□ -0.41
TCF4-248ENST00000616053 TACSTD2P09758 323 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 GP1BBP13224 206 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 CXCL9Q07325 125 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 CNTD1Q8N815 330 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 GRHL3Q8TE85 626 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 SLC7A6OSQ96CW6 309 aaPredicted RBP12.47□□□□□ -0.41
TCF4-248ENST00000616053 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
TCF4-248ENST00000616053 TPST2O60704 377 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 HACD2Q6Y1H2 254 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 GPR88Q9GZN0 384 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 ICKQ9UPZ9 632 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 SFTPBP07988 381 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 RGS6P49758 472 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 PLEKHG6Q3KR16 790 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 FAM180BQ6P0A1 224 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 MED27Q6P2C8 311 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 UBE2Q1Q7Z7E8 422 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 COMTD1Q86VU5 262 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 OR52K1Q8NGK4 314 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 TBC1D15Q8TC07 691 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 CNDP2Q96KP4 475 aaKnown RBP12.47□□□□□ -0.41
TCF4-248ENST00000616053 ORAI3Q9BRQ5 295 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 ADAP2Q9NPF8 381 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 ACSS2Q9NR19 701 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 KCNK4Q9NYG8 393 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 CA14Q9ULX7 337 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 PZPP20742 1482 aa12.47□□□□□ -0.41
TCF4-248ENST00000616053 CRYBA1P05813 215 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 SDC2P34741 201 aa12.46□□□□□ -0.41
TCF4-248ENST00000616053 IFI35P80217 286 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms