RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 PRR11Q96HE9 360 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-207ENST00000556831 SGSM3Q96HU1 749 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 SLC46A1Q96NT5 459 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 CFAP20Q9Y6A4 193 aaKnown RBP13.78□□□□□ -0.2
SLIRP-207ENST00000556831 MAD1L1Q9Y6D9 718 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 PRAMEF33A0A0G2JMD5 474 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 UBA6A0AVT1 1052 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-207ENST00000556831 A8MU76 341 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 NDC80O14777 642 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 KDM1AO60341 852 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 TMEM63AO94886 807 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 VAPBO95292 243 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 NMBRP28336 390 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 PRKAA1Q13131 559 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 THOC5Q13769 683 aaKnown RBP13.77□□□□□ -0.21
SLIRP-207ENST00000556831 PTK6Q13882 451 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 C16orf72Q14CZ0 275 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 DNAJC21Q5F1R6 531 aaKnown RBP13.77□□□□□ -0.21
SLIRP-207ENST00000556831 ANKRD22Q5VYY1 191 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 IRGCQ6NXR0 463 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 ZNF534Q76KX8 674 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 OOSP2Q86WS3 158 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 GPR150Q8NGU9 434 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 ZFPM2Q8WW38 1151 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 SLCO2A1Q92959 643 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 ZNF669Q96BR6 464 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-207ENST00000556831 RMDN2Q96LZ7 410 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 SERPINB12Q96P63 405 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 TGM7Q96PF1 710 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 PANX3Q96QZ0 392 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 FERD3LQ96RJ6 166 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 KIFC1Q9BW19 673 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 ASCL3Q9NQ33 180 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 TREX1Q9NSU2 369 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 PCYOX1Q9UHG3 505 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 GNPTGQ9UJJ9 305 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 VPS9D1Q9Y2B5 631 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 MYO9AB2RTY4 2548 aa13.77□□□□□ -0.21
SLIRP-207ENST00000556831 URB1O60287 2271 aaKnown RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 MN1Q10571 1320 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 DYNC1I1O14576 645 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 DNALI1O14645 258 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 PRMT5O14744 637 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 CAPN5O15484 640 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 SGTAO43765 313 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 AVILO75366 819 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 APOA4P06727 396 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 ITIH1P19827 911 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 ITPKBP27987 946 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 EIF2S3P41091 472 aaKnown RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 PREPP48147 710 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 ARL4DP49703 201 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 RAB15P59190 212 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 CFHR1Q03591 330 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 DHX34Q14147 1143 aaKnown RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 BRD3Q15059 726 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 COL28A1Q2UY09 1125 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 IZUMO3Q5VZ72 239 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 KIAA0930Q6ICG6 404 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 DUS1LQ6P1R4 473 aaKnown RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 CYB5D1Q6P9G0 228 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 CES3Q6UWW8 571 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 HOOK3Q86VS8 718 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 LRRC6Q86X45 466 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 MFSD3Q96ES6 412 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 NAF1Q96HR8 494 aaKnown RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 INSM2Q96T92 566 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-207ENST00000556831 KCND1Q9NSA2 647 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 TMEM9Q9P0T7 183 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 PCDHB11Q9Y5F2 797 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 PCDHGA7Q9Y5G6 932 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 RPS6KL1Q9Y6S9 549 aa13.76□□□□□ -0.21
SLIRP-207ENST00000556831 FAM237BA0A1B0GVD1 139 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 EFCAB7A8K855 629 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 SMAPO00193 183 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 TOX3O15405 576 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 OR1I1O60431 355 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 RPN2P04844 631 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 CD151P48509 253 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 EIF3BP55884 814 aaKnown RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 ETF1P62495 437 aaKnown RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 DNTTIP2Q5QJE6 756 aaKnown RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 XKR5Q6UX68 686 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 ZNF574Q6ZN55 896 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 CLEC14AQ86T13 490 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 ZNF605Q86T29 641 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 LDB1Q86U70 411 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 CAND1Q86VP6 1230 aaKnown RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 NAT8LQ8N9F0 302 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 ACVR1CQ8NER5 493 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 SKA2Q8WVK7 121 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 HNRNPLLQ8WVV9 542 aaKnown RBP13.75□□□□□ -0.21
SLIRP-207ENST00000556831 ASZ1Q8WWH4 475 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 RSC1A1Q92681 617 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 TAAR9Q96RI9 348 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 ASPSCR1Q9BZE9 553 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 DPH1Q9BZG8 443 aa13.75□□□□□ -0.21
SLIRP-207ENST00000556831 CCDC68Q9H2F9 335 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms