RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PTRHD1Q6GMV3 140 aaKnown RBP14.82□□□□□ -0.04
ACTN1-217ENST00000556203 ARHGAP22Q7Z5H3 698 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 SDCCAG8Q86SQ7 713 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-217ENST00000556203 TMEM135Q86UB9 458 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 PDZD3Q86UT5 571 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 HOOK3Q86VS8 718 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 KRT222Q8N1A0 295 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 LKAAEAR1Q8TD35 194 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 ZFPM2Q8WW38 1151 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 USP7Q93009 1102 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 SIGLEC10Q96LC7 697 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 C9orf72Q96LT7 481 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 FERD3LQ96RJ6 166 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 KRT12Q99456 494 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 TSSK1BQ9BXA7 367 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 IL1RAPL1Q9NZN1 696 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 PCDHGA7Q9Y5G6 932 aa14.82□□□□□ -0.04
ACTN1-217ENST00000556203 FREM2Q5SZK8 3169 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 ZCWPW2A0A1B0GU75 182 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 UBA6A0AVT1 1052 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-217ENST00000556203 SLC5A10A0PJK1 596 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 EFCAB7A8K855 629 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 USP1O94782 785 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 FGF3P11487 239 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-217ENST00000556203 SLC5A2P31639 672 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 CCR7P32248 378 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 CSE1LP55060 971 aaKnown RBP14.81□□□□□ -0.04
ACTN1-217ENST00000556203 EIF3BP55884 814 aaKnown RBP14.81□□□□□ -0.04
ACTN1-217ENST00000556203 PLOD1Q02809 727 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-217ENST00000556203 TYSND1Q2T9J0 566 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 DNAJC21Q5F1R6 531 aaKnown RBP14.81□□□□□ -0.04
ACTN1-217ENST00000556203 RNF187Q5TA31 235 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-217ENST00000556203 NEPROQ6NW34 567 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 IRGCQ6NXR0 463 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 KLHL35Q6PF15 583 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 LRRC69Q6ZNQ3 347 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 LRRC6Q86X45 466 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 FAM129CQ86XR2 697 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 ZNF248Q8NDW4 579 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 PHC3Q8NDX5 983 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 ACVR1CQ8NER5 493 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 HNRNPLLQ8WVV9 542 aaKnown RBP14.81□□□□□ -0.04
ACTN1-217ENST00000556203 TFGQ92734 400 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-217ENST00000556203 STAMBPL1Q96FJ0 436 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 TRIM31Q9BZY9 425 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 P2RY12Q9H244 342 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 OCIAD1Q9NX40 245 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 GNPTGQ9UJJ9 305 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 APC2O95996 2303 aa14.81□□□□□ -0.04
ACTN1-217ENST00000556203 OR5K3A6NET4 321 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 C9orf172C9J069 976 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 BHMG1C9JSJ3 638 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-217ENST00000556203 PFDN6O15212 129 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 PRAMEF10O60809 474 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 RASSF9O75901 435 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 ANKRD34CP0C6C1 535 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 OGNP20774 298 aaKnown RBP14.8□□□□□ -0.04
ACTN1-217ENST00000556203 RPS3P23396 243 aaKnown RBP eCLIP14.8□□□□□ -0.04
ACTN1-217ENST00000556203 PPP1CAP62136 330 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 MRPS25P82663 173 aaKnown RBP14.8□□□□□ -0.04
ACTN1-217ENST00000556203 DHX9Q08211 1270 aaKnown RBP14.8□□□□□ -0.04
ACTN1-217ENST00000556203 C2orf54Q08AI8 447 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 MORF4L2Q15014 288 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 C19orf48Q6RUI8 117 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 FAM92BQ6ZTR7 304 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 OOSP2Q86WS3 158 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 CILP2Q8IUL8 1156 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 SPATA4Q8NEY3 305 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 KCNE4Q8WWG9 221 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 LPGAT1Q92604 370 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 ZDHHC12Q96GR4 267 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 C16orf45Q96MC5 204 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-217ENST00000556203 PANX3Q96QZ0 392 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 HGH1Q9BTY7 390 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 CARD6Q9BX69 1037 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 RAB33BQ9H082 229 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 MVB12BQ9H7P6 319 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 FOXJ2Q9P0K8 574 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 EPHA6Q9UF33 1036 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 ASF1AQ9Y294 204 aa14.8□□□□□ -0.04
ACTN1-217ENST00000556203 BPTFQ12830 3046 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 OR6C74A6NCV1 312 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 EFCAB8A8MWE9 144 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 B4E171 279 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 NVLO15381 856 aaKnown RBP14.79□□□□□ -0.04
ACTN1-217ENST00000556203 TOX3O15405 576 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-217ENST00000556203 KIF1CO43896 1103 aaKnown RBP14.79□□□□□ -0.04
ACTN1-217ENST00000556203 BANF1O75531 89 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 KRT37O76014 449 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 APOA4P06727 396 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 F7P08709 466 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-217ENST00000556203 PGAM1P18669 254 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 ITPKBP27987 946 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 ACADLP28330 430 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 FMO4P31512 558 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 TSPAN7P41732 249 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 ITGA8P53708 1063 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 HSPA14Q0VDF9 509 aa14.79□□□□□ -0.04
ACTN1-217ENST00000556203 THOC5Q13769 683 aaKnown RBP14.79□□□□□ -0.04
ACTN1-217ENST00000556203 TMED2Q15363 201 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms