RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 PREPP48147 710 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 ARCN1P48444 511 aaKnown RBP19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 KRT33BQ14525 404 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 PLCL1Q15111 1095 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 RNASEH2BQ5TBB1 312 aaKnown RBP19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 KIAA0930Q6ICG6 404 aaPredicted RBP19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 MRNIPQ6NTE8 343 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 C19orf48Q6RUI8 117 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 SYDE1Q6ZW31 735 aaPredicted RBP19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 PCGF5Q86SE9 256 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 LDB1Q86U70 411 aaPredicted RBP19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 SPACA3Q8IXA5 215 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 ELMO1Q92556 727 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 NAF1Q96HR8 494 aaKnown RBP19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 TGM7Q96PF1 710 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 CARD6Q9BX69 1037 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 TSSK1BQ9BXA7 367 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 OCIAD1Q9NX40 245 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 KLHL3Q9UH77 587 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 ASIC3Q9UHC3 531 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 PCDHGA3Q9Y5H0 932 aa19.59■□□□□ 0.73
CACNA2D4-215ENST00000542340 PIKFYVEQ9Y2I7 2098 aa19.58■□□□□ 0.73
CACNA2D4-215ENST00000542340 LAMA5O15230 3695 aa19.58■□□□□ 0.73
CACNA2D4-215ENST00000542340 SLC5A10A0PJK1 596 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 EFCAB7A8K855 629 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 DNALI1O14645 258 aaPredicted RBP19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 PRAMEF10O60809 474 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 LEPRP48357 1165 aaKnown RBP19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 SDCCAG8Q86SQ7 713 aaPredicted RBP19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 TMEM135Q86UB9 458 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 PDZD3Q86UT5 571 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 LRRC6Q86X45 466 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 KLHL7Q8IXQ5 586 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 BMPERQ8N8U9 685 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 ACVR1CQ8NER5 493 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 JPH3Q8WXH2 748 aaPredicted RBP19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 TFGQ92734 400 aaPredicted RBP19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 FERD3LQ96RJ6 166 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 TCF12Q99081 682 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 DDA1Q9BW61 102 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 MVB12BQ9H7P6 319 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 SLC39A1Q9NY26 324 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 ITPR1Q14643 2758 aa19.58■□□□□ 0.72
CACNA2D4-215ENST00000542340 KLK10O43240 276 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 NDUFS3O75489 264 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 CD82P27701 267 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 ETF1P62495 437 aaKnown RBP19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 DR1Q01658 176 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 MC2RQ01718 297 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 TLE3Q04726 772 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 COL28A1Q2UY09 1125 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 ANKRD20A4Q4UJ75 823 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 PRSS42Q7Z5A4 293 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 HOOK3Q86VS8 718 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 FAM129CQ86XR2 697 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 ART4Q93070 314 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 SIGLEC10Q96LC7 697 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 ASPSCR1Q9BZE9 553 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 P2RY12Q9H244 342 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 ZNF768Q9H5H4 540 aaKnown RBP19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 FBXO8Q9NRD0 319 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 SSUH2Q9Y2M2 353 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 CHD6Q8TD26 2715 aa19.57■□□□□ 0.72
CACNA2D4-215ENST00000542340 OR5K3A6NET4 321 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 PFDN6O15212 129 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 RPS3P23396 243 aaKnown RBP eCLIP19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 IVDP26440 423 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 ACADLP28330 430 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 CCR7P32248 378 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 RAB15P59190 212 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 BOP1Q14137 746 aaKnown RBP19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 DHX34Q14147 1143 aaKnown RBP19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 BRD3Q15059 726 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 TYSND1Q2T9J0 566 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 SYTL3Q4VX76 610 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 RNF187Q5TA31 235 aaPredicted RBP19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 NEPROQ6NW34 567 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 IRGCQ6NXR0 463 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 OOSP2Q86WS3 158 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 C17orf53Q8N3J3 647 aaPredicted RBP19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 OTUD6BQ8N6M0 293 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 PHC3Q8NDX5 983 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 FCRL3Q96P31 734 aaPredicted RBP19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 HRASLS2Q9NWW9 162 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 FOXJ2Q9P0K8 574 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 GNPTGQ9UJJ9 305 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 RPS6KL1Q9Y6S9 549 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 CFAP47Q6ZTR5 3102 aa19.56■□□□□ 0.72
CACNA2D4-215ENST00000542340 ZCWPW2A0A1B0GU75 182 aa19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 OR6C74A6NCV1 312 aa19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 BHMG1C9JSJ3 638 aaPredicted RBP19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 RASSF9O75901 435 aa19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 OGNP20774 298 aaKnown RBP19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 CASQ1P31415 396 aa19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 UCNP55089 124 aa19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 CLN3Q13286 438 aa19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 DCAF12Q5T6F0 453 aa19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 CACHD1Q5VU97 1274 aa19.55■□□□□ 0.72
CACNA2D4-215ENST00000542340 BROXQ5VW32 411 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms