RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 AARSD1Q9BTE6 412 aaKnown RBP12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 OR52A5Q9H2C5 316 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 OSGEPL1Q9H4B0 414 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 VPS37BQ9H9H4 285 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 SIRPGQ9P1W8 387 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 ZNF624Q9P2J8 865 aaPredicted RBP12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 B4DGG1 531 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 H3BMM5 538 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 SNX2O60749 519 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 TRIM16O95361 564 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 PDHA2P29803 388 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 STX2P32856 288 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 ABCG1P45844 678 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 GBX1Q14549 363 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 EFTUD2Q15029 972 aaKnown RBP eCLIP12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 C14orf28Q4W4Y0 310 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 RBM20Q5T481 1227 aaKnown RBP12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 ZC3HC1Q86WB0 502 aaKnown RBP12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 ARL14Q8N4G2 192 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 ELMO1Q92556 727 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 CDC6Q99741 560 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 SH3GL2Q99962 352 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 TOR4AQ9NXH8 423 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 ACSL5Q9ULC5 683 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 COMMD10Q9Y6G5 202 aa12.46□□□□□ -0.42
RPUSD4-208ENST00000533628 EME2A4GXA9 379 aaPredicted RBP12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 F8W8V4 182 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 LIN7AO14910 233 aaPredicted RBP12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 EZRP15311 586 aaKnown RBP12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 SDHBP21912 280 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 ACP1P24666 158 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 RPL10P27635 214 aaKnown RBP12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 CD151P48509 253 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 CLCN7P51798 805 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 PMS2P54278 862 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 MAZP56270 477 aaKnown RBP12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 UBE2IP63279 158 aaKnown RBP12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 ACTN3Q08043 901 aaPredicted RBP12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 RPA4Q13156 261 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 RBBP5Q15291 538 aaKnown RBP12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 TRMT10CQ7L0Y3 403 aaKnown RBP12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 STRA8Q7Z7C7 330 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 ACVR1CQ8NER5 493 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 SLC37A2Q8TED4 501 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 RMDN2Q96LZ7 410 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 PANX3Q96QZ0 392 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 SLC30A3Q99726 388 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 ACSS3Q9H6R3 686 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 NSMCE4AQ9NXX6 385 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 FAM8A1Q9UBU6 413 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 FTSJ1Q9UET6 329 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 PADI4Q9UM07 663 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 CFAP54Q96N23 3096 aa12.45□□□□□ -0.42
RPUSD4-208ENST00000533628 TRBV23OR9-2A0A075B6M9 112 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 OR5K4A6NMS3 321 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 GIPC1O14908 333 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 TNFSF14O43557 240 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 SLCO2B1O94956 709 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 ACSL3O95573 720 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 CKMT2P17540 419 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 XRCC1P18887 633 aaPredicted RBP12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 CD9P21926 228 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 ACADLP28330 430 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 SLC19A1P41440 591 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 PREPP48147 710 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 DNAJC3Q13217 504 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 NR0B2Q15466 257 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 TRIP6Q15654 476 aaKnown RBP12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 SEPT7Q16181 437 aaKnown RBP12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 VRK3Q8IV63 474 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 AENQ8WTP8 325 aaKnown RBP12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 CDKL2Q92772 493 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 KCNJ9Q92806 393 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 INSM2Q96T92 566 aaPredicted RBP12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 NDNQ99608 321 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 TSSK1BQ9BXA7 367 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 WWP1Q9H0M0 922 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 BATF3Q9NR55 127 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 KLHL42Q9P2K6 505 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 CORO1CQ9ULV4 474 aaPredicted RBP12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 PSMD13Q9UNM6 376 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 PCNX2A6NKB5 2137 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 CEP250Q9BV73 2442 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 KIR2DS5A0A0G2JLQ3 304 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 A0A0G2JNG1 304 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 KIR2DS3K7RE56 304 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 PPM1DO15297 605 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 RIPK2O43353 540 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 DKK1O94907 266 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 SNUPNO95149 360 aaKnown RBP12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 ABHD2P08910 425 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 CEACAM1P13688 526 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 PHBP35232 272 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 GCKP35557 465 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 FASLGP48023 281 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 ACADVLP49748 655 aa12.44□□□□□ -0.42
RPUSD4-208ENST00000533628 CDKN2DP55273 166 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms