RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SLC25A28Q96A46 364 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 AP2M1Q96CW1 435 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 SPDL1Q96EA4 605 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 SGF29Q96ES7 293 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 ZNF333Q96JL9 665 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 CCDC17Q96LX7 622 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 PANX3Q96QZ0 392 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 SLC22A12Q96S37 553 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 CPNE1Q99829 537 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 DDX47Q9H0S4 455 aaKnown RBP4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 RAD21L1Q9H4I0 556 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 CATSPERBQ9H7T0 1116 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 FAM212BQ9NTI7 297 aaPredicted RBP4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 STK39Q9UEW8 545 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 CNOT6Q9ULM6 557 aaKnown RBP4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 FOXA2Q9Y261 457 aaPredicted RBP4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 MAP3K2Q9Y2U5 619 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 TMED5Q9Y3A6 229 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 MAB21L2Q9Y586 359 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 SNX9Q9Y5X1 595 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 STON1Q9Y6Q2 735 aa4.23□□□□□ -1.73
AC055878.1-201ENST00000531858 ZNF335Q9H4Z2 1342 aaPredicted RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 NCAPD2Q15021 1401 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 A0A0A6YYC8 382 aaPredicted RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 A0A0G2JPF8 293 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 DENND3A2RUS2 1198 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 CXorf65A6NEN9 183 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 EIF4E1BA6NMX2 242 aaKnown RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 HNRNPCL3B7ZW38 293 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 H0YC42 278 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 H0YGN5 161 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 I3L1I5 382 aaPredicted RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 M0QZ24 198 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 PPIP5K2O43314 1243 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 NUDT21O43809 227 aaKnown RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 CYTIPO60759 359 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 ATP2C2O75185 946 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 NEURL1O76050 574 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 NDUFA10O95299 355 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 PTBP3O95758 552 aaKnown RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 CHRM2P08172 466 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 HNRNPCL4P0DMR1 293 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 ZNF18P17022 549 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 MAOAP21397 527 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 COMTP21964 271 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 MTIF2P46199 727 aaKnown RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 CDX1P47902 265 aaPredicted RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 ME1P48163 572 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 LHX1P48742 406 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 CLCN5P51795 746 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 SH3BGRP55822 239 aaPredicted RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 TGFB2P61812 414 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 SNRPEP62304 92 aaKnown RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 POLR2LP62875 67 aaKnown RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 CCNA1P78396 465 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 GUCY1B3Q02153 619 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 EGR4Q05215 589 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 FAM27E3Q08E93 113 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 MAD2L1Q13257 205 aaPredicted RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 PKP1Q13835 747 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 NEDD9Q14511 834 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 SSPNQ14714 243 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 MLANAQ16655 118 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 MEP1AQ16819 746 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 SHROOM1Q2M3G4 852 aaPredicted RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 EPC2Q52LR7 807 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 XKR9Q5GH70 373 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 PCID2Q5JVF3 399 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 DCAF12L2Q5VW00 463 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 DLK2Q6UY11 383 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 DLEU7Q6UYE1 221 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 RBM44Q6ZP01 1051 aaKnown RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 OTUD6AQ7L8S5 288 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 PIGWQ7Z7B1 504 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 VASH2Q86V25 355 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 AMZ2Q86W34 360 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 CCDC25Q86WR0 208 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 FAM219AQ8IW50 185 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 DDIASQ8IXT1 998 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 PARP16Q8N5Y8 322 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 HM13Q8TCT9 377 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 RNASE8Q8TDE3 154 aaKnown RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 RNF139Q8WU17 664 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 CHURC1Q8WUH1 139 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 DAZAP1Q96EP5 407 aaKnown RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 DTD2Q96FN9 168 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 OTUB1Q96FW1 271 aaPredicted RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 SPATA33Q96N06 139 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 SFXN2Q96NB2 322 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 OR6C1Q96RD1 312 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 OLFM1Q99784 485 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 ATG101Q9BSB4 218 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 KLC2Q9H0B6 622 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 THAP2Q9H0W7 228 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 MVB12BQ9H7P6 319 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 LRRC40Q9H9A6 602 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 MKKSQ9NPJ1 570 aaPredicted RBP4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 TRPV5Q9NQA5 729 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 PCSK1NQ9UHG2 260 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 TLK1Q9UKI8 766 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms