RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 RAB5CP51148 216 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ERVK-25P63136 954 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 LRIT3Q3SXY7 679 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 CTRB2Q6GPI1 263 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 KCNT2Q6UVM3 1135 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 CES3Q6UWW8 571 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SLC41A1Q8IVJ1 513 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 C4orf32Q8N8J7 132 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ZSCAN1Q8NBB4 408 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 KCNN1Q92952 543 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SGK3Q96BR1 496 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SYT17Q9BSW7 474 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 FXYD6Q9H0Q3 95 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 IL1RAPQ9NPH3 570 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ABI2Q9NYB9 513 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 UPB1Q9UBR1 384 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SLC27A5Q9Y2P5 690 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SLIT2O94813 1529 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 BCL9LQ86UU0 1499 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 NID2Q14112 1375 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 PRSS51A0A1B0GVH4 220 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 A0A1B0GVM2 712 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SLC1A7O00341 560 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 PROM1O43490 865 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 IPO13O94829 963 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SERPINA3P01011 423 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 HMBSP08397 361 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 GSTM1P09488 218 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 CLTBP09497 229 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 BMP4P12644 408 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 PSMA3P25788 255 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 CHI3L1P36222 383 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 GMPRP36959 345 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 MAGEA12P43365 314 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 RGS6P49758 472 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 NCS1P62166 190 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 RPP38P78345 283 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ZNF234Q14588 700 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 TCEAL1Q15170 157 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 UAP1L1Q3KQV9 507 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ATP13A4Q4VNC1 1196 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 NOMO2Q5JPE7 1267 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 NDUFAF5Q5TEU4 345 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 OVOS1Q6IE37 1185 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 HACD2Q6Y1H2 254 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 MSANTD1Q6ZTZ1 278 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 PTGR2Q8N8N7 351 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 NAT8LQ8N9F0 302 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SNIP1Q8TAD8 396 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 NDNFQ8TB73 568 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ST8SIA4Q92187 359 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 UFD1Q92890 307 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 PCDHB18PQ96TA0 734 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 TARS2Q9BW92 718 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 JPH1Q9HDC5 661 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 GPATCH2LQ9NWQ4 482 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ERVK13-1Q9NX77 482 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 MALT1Q9UDY8 824 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 GPSM3Q9Y4H4 160 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 C10orf71Q711Q0 1435 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 H3BUI4 141 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 KPNA6O60684 536 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SLC22A5O76082 557 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 AMHP03971 560 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 CSH1P0DML2 217 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 CSH2P0DML3 217 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 LCP1P13796 627 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SPIBQ01892 262 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SREBF2Q12772 1141 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 TRIM28Q13263 835 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 PITRM1Q5JRX3 1037 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 C1orf189Q5VU69 101 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ARMC6Q6NXE6 501 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 APOBEC3FQ8IUX4 373 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 PSTKQ8IV42 348 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 OR4A15Q8NGL6 344 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 C10orf90Q96M02 699 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 RNF157Q96PX1 679 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 CGRRF1Q99675 332 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 RANGRFQ9HD47 186 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 AAASQ9NRG9 546 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ANKEF1Q9NU02 776 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 MGAT4BQ9UQ53 548 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 FARP1Q9Y4F1 1045 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 CASZ1Q86V15 1759 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 LRRC14BA6NHZ5 514 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ADAMDEC1O15204 470 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SUV39H1O43463 412 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SLC19A2O60779 497 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 GCATO75600 419 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 HMGCRP04035 888 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 MTHFD1P11586 935 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 GMPSP49915 693 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ATP4BP51164 291 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 AFF1P51825 1210 aaKnown RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 EMP3P54852 163 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 MLLT1Q03111 559 aaPredicted RBP5.08□□□□□ -1.6
SCN11A-202ENST00000444237 FGL1Q08830 312 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 SMARCB1Q12824 385 aa5.08□□□□□ -1.6
SCN11A-202ENST00000444237 ZNF235Q14590 738 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms