RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 LMO7DNF2Z398 122 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 SCAMP1O15126 338 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 SGTAO43765 313 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 POP7O75817 140 aaKnown RBP25.47■■□□□ 1.67
NME3-208ENST00000565379 ABHD2P08910 425 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 JUPP14923 745 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 DAB2P98082 770 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 INSM1Q01101 510 aaPredicted RBP25.47■■□□□ 1.67
NME3-208ENST00000565379 CTBSQ01459 385 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 DMPKQ09013 629 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 C1orf61Q13536 156 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 TCEA2Q15560 299 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 INSCQ1MX18 579 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 MAP9Q49MG5 647 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 PTRHD1Q6GMV3 140 aaKnown RBP25.47■■□□□ 1.67
NME3-208ENST00000565379 C11orf96Q7Z7L8 435 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 PDZD3Q86UT5 571 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 GSPT2Q8IYD1 628 aaKnown RBP25.47■■□□□ 1.67
NME3-208ENST00000565379 CLDN19Q8N6F1 224 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 CYTH2Q99418 400 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 DUSP23Q9BVJ7 150 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 DOLKQ9UPQ8 538 aa25.47■■□□□ 1.67
NME3-208ENST00000565379 A0A087WUV0 522 aaPredicted RBP25.46■■□□□ 1.67
NME3-208ENST00000565379 ANXA6P08133 673 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 CELA2BP08218 269 aaPredicted RBP25.46■■□□□ 1.67
NME3-208ENST00000565379 ALPPL2P10696 532 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 ACP5P13686 325 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 EIF3BP55884 814 aaKnown RBP25.46■■□□□ 1.67
NME3-208ENST00000565379 DEFB133Q30KQ1 61 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 TAF8Q7Z7C8 310 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 OR2L2Q8NH16 312 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 HNRNPLLQ8WVV9 542 aaKnown RBP25.46■■□□□ 1.67
NME3-208ENST00000565379 ACSS3Q9H6R3 686 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 FBXO6Q9NRD1 293 aaPredicted RBP25.46■■□□□ 1.67
NME3-208ENST00000565379 NLGN3Q9NZ94 848 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 PRKAB1Q9Y478 270 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 PRSS21Q9Y6M0 314 aa25.46■■□□□ 1.67
NME3-208ENST00000565379 KPNA5O15131 536 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 CASC3O15234 703 aaKnown RBP25.45■■□□□ 1.66
NME3-208ENST00000565379 ACSL3O95573 720 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 PKMP14618 531 aaKnown RBP25.45■■□□□ 1.66
NME3-208ENST00000565379 CD151P48509 253 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 MPP1Q00013 466 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 PLOD1Q02809 727 aaPredicted RBP25.45■■□□□ 1.66
NME3-208ENST00000565379 CNPY4Q8N129 248 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 CCDC97Q96F63 343 aaPredicted RBP25.45■■□□□ 1.66
NME3-208ENST00000565379 BIRC8Q96P09 236 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 CPNE1Q99829 537 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 KLC4Q9NSK0 619 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 CRYL1Q9Y2S2 319 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 PCYT1BQ9Y5K3 369 aaPredicted RBP25.45■■□□□ 1.66
NME3-208ENST00000565379 LRP4O75096 1905 aa25.45■■□□□ 1.66
NME3-208ENST00000565379 RIPK2O43353 540 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 HAUS5O94927 633 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 AHSGP02765 367 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 CDK4P11802 303 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 CKMT1AP12532 417 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 FMO4P31512 558 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 CSE1LP55060 971 aaKnown RBP25.44■■□□□ 1.66
NME3-208ENST00000565379 KLHL38Q2WGJ6 581 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 KBTBD12Q3ZCT8 623 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 STRA8Q7Z7C7 330 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 CTAGE3PQ8IX95 158 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 HM13Q8TCT9 377 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 AENQ8WTP8 325 aaKnown RBP25.44■■□□□ 1.66
NME3-208ENST00000565379 CAVIN3Q969G5 261 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 RABGEF1Q9UJ41 708 aa25.44■■□□□ 1.66
NME3-208ENST00000565379 C1QAP02745 245 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 SLC2A4P14672 509 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 IDSP22304 550 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 GP5P40197 560 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 ACTR1BP42025 376 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 ACTR1AP61163 376 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 ILKQ13418 452 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 NRROSQ86YC3 692 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 BEND7Q8N7W2 519 aaPredicted RBP25.43■■□□□ 1.66
NME3-208ENST00000565379 SMYD2Q9NRG4 433 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 KLHL42Q9P2K6 505 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 SLC23A2Q9UGH3 650 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 ACSL5Q9ULC5 683 aa25.43■■□□□ 1.66
NME3-208ENST00000565379 BPTFQ12830 3046 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 LIN7AO14910 233 aaPredicted RBP25.42■■□□□ 1.66
NME3-208ENST00000565379 YY2O15391 372 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 RPA4Q13156 261 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 PLA2G4EQ3MJ16 856 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 ZNF789Q5FWF6 425 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 CTSL3PQ5NE16 218 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 GRTP1Q5TC63 336 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 CNSTQ6PJW8 725 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 WASH2PQ6VEQ5 465 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 KCNJ9Q92806 393 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 GLMNQ92990 594 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 RHOJQ9H4E5 214 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 WASH6PQ9NQA3 447 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 LATS2Q9NRM7 1088 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 SPATS2LQ9NUQ6 558 aaKnown RBP25.42■■□□□ 1.66
NME3-208ENST00000565379 NCKIPSDQ9NZQ3 722 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 TAAR2Q9P1P5 351 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 KCNK6Q9Y257 313 aa25.42■■□□□ 1.66
NME3-208ENST00000565379 RP1P56715 2156 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms