RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 RMDN2Q96LZ7 410 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 OR52A5Q9H2C5 316 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 SARS2Q9NP81 518 aaKnown RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 PPANQ9NQ55 473 aaKnown RBP14.78□□□□□ -0.04
CD9-210ENST00000543916 CPNE7Q9UBL6 633 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 ACSL5Q9ULC5 683 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 SPEGQ15772 3267 aa14.78□□□□□ -0.04
CD9-210ENST00000543916 SLC5A10A0PJK1 596 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 F8W8V4 182 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 LIN7AO14910 233 aaPredicted RBP14.77□□□□□ -0.05
CD9-210ENST00000543916 NIPSNAP2O75323 286 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 HAUS5O94927 633 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 ESR1P03372 595 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 SLC35G4P0C7Q5 338 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 PNLIPP16233 465 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 XRCC1P18887 633 aaPredicted RBP14.77□□□□□ -0.05
CD9-210ENST00000543916 GABRB3P28472 473 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 HALP42357 657 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 MAGEA4P43358 317 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 GPX6P59796 221 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 INSM1Q01101 510 aaPredicted RBP14.77□□□□□ -0.05
CD9-210ENST00000543916 MGAT5Q09328 741 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 NR1D2Q14995 579 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 RPE65Q16518 533 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 TEX35Q5T0J7 233 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 TEDDM1Q5T9Z0 273 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 CAPRIN2Q6IMN6 1127 aaKnown RBP14.77□□□□□ -0.05
CD9-210ENST00000543916 DUS1LQ6P1R4 473 aaKnown RBP14.77□□□□□ -0.05
CD9-210ENST00000543916 ZNF549Q6P9A3 640 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 CNSTQ6PJW8 725 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 SPRED1Q7Z699 444 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 SLC9B2Q86UD5 537 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 PALM2Q8IXS6 379 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 CHCHD4Q8N4Q1 142 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 Q8N9G6 341 aaPredicted RBP14.77□□□□□ -0.05
CD9-210ENST00000543916 INSM2Q96T92 566 aaPredicted RBP14.77□□□□□ -0.05
CD9-210ENST00000543916 FAM129AQ9BZQ8 928 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 MOCS1Q9NZB8 636 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 CDYLQ9Y232 598 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 VPS9D1Q9Y2B5 631 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 PCDHB1Q9Y5F3 818 aa14.77□□□□□ -0.05
CD9-210ENST00000543916 CFAP20Q9Y6A4 193 aaKnown RBP14.77□□□□□ -0.05
CD9-210ENST00000543916 RP1P56715 2156 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 MED19A0JLT2 244 aaPredicted RBP14.76□□□□□ -0.05
CD9-210ENST00000543916 ADRB1P08588 477 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 PKMP14618 531 aaKnown RBP14.76□□□□□ -0.05
CD9-210ENST00000543916 AOAHP28039 575 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 ABCG1P45844 678 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 LEPRP48357 1165 aaKnown RBP14.76□□□□□ -0.05
CD9-210ENST00000543916 CSE1LP55060 971 aaKnown RBP14.76□□□□□ -0.05
CD9-210ENST00000543916 OR1D5P58170 312 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 CCL7P80098 99 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 E2F1Q01094 437 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 FOXC1Q12948 553 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 RPA4Q13156 261 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 BIRC2Q13490 618 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 SYTL3Q4VX76 610 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 SPNS2Q8IVW8 549 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 TRIM48Q8IWZ4 208 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 CXorf40BQ96DE9 158 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 C12orf66Q96MD2 445 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 TSSK1BQ9BXA7 367 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 SMYD2Q9NRG4 433 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 POT1Q9NUX5 634 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 IMP3Q9NV31 184 aaKnown RBP14.76□□□□□ -0.05
CD9-210ENST00000543916 GALPQ9UBC7 116 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 MTRF1LQ9UGC7 380 aaKnown RBP14.76□□□□□ -0.05
CD9-210ENST00000543916 WASF3Q9UPY6 502 aa14.76□□□□□ -0.05
CD9-210ENST00000543916 CACNA1AO00555 2505 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 A0A1W2PQM1 296 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 H3BMM5 538 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 NTN3O00634 580 aaPredicted RBP14.75□□□□□ -0.05
CD9-210ENST00000543916 B4GAT1O43505 415 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 HYAL3O43820 417 aaPredicted RBP14.75□□□□□ -0.05
CD9-210ENST00000543916 GPC4O75487 556 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 PIAS1O75925 651 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 VIPP01282 170 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 AHSGP02765 367 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 RPLP0P05388 317 aaKnown RBP14.75□□□□□ -0.05
CD9-210ENST00000543916 MTHFD1P11586 935 aaKnown RBP14.75□□□□□ -0.05
CD9-210ENST00000543916 CDK4P11802 303 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 ALDH4A1P30038 563 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 GPR3P46089 330 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 CUL1Q13616 776 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 UBAP2Q5T6F2 1119 aaKnown RBP14.75□□□□□ -0.05
CD9-210ENST00000543916 HES3Q5TGS1 186 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 KIAA0408Q6ZU52 694 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 ERMP1Q7Z2K6 904 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 PDZD3Q86UT5 571 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 VRK3Q8IV63 474 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 IFT20Q8IY31 132 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 GABPB2Q8TAK5 448 aaPredicted RBP14.75□□□□□ -0.05
CD9-210ENST00000543916 FAM136AQ96C01 138 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 PANX3Q96QZ0 392 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 FMO2Q99518 471 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 ABCG4Q9H172 646 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 STN1Q9H668 368 aaKnown RBP14.75□□□□□ -0.05
CD9-210ENST00000543916 SYNDIG1Q9H7V2 258 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 LRRC4CQ9HCJ2 640 aa14.75□□□□□ -0.05
CD9-210ENST00000543916 SLC40A1Q9NP59 571 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms