RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 RAD18Q9NS91 495 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 SIRPGQ9P1W8 387 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 KLHL14Q9P2G3 628 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 ATXN10Q9UBB4 475 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 MOSPD1Q9UJG1 213 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 RALYQ9UKM9 306 aaKnown RBP7.94□□□□□ -1.14
SCN1A-207ENST00000507401 NOVA2Q9UNW9 492 aaKnown RBP7.94□□□□□ -1.14
SCN1A-207ENST00000507401 SATB2Q9UPW6 733 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.94□□□□□ -1.14
SCN1A-207ENST00000507401 ACTL7BQ9Y614 415 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 CAPN6Q9Y6Q1 641 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 COMMD3-BMI1R4GMX3 469 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 UNC13CQ8NB66 2214 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 ARHGEF17Q96PE2 2063 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 BPTFQ12830 3046 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 C1orf232A0A0U1RR37 186 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 A0A1W2PNU3 283 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 MAGEA13PA6NCF6 341 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 CDRT15L2A8MXV6 281 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 RAD51CO43502 376 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 B4GAT1O43505 415 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 PSTPIP1O43586 416 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 SPOPO43791 374 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 DCTN3O75935 186 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 UNC5CO95185 931 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 EPOP01588 193 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 KRT1P04264 644 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 RPLP0P05388 317 aaKnown RBP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 FAM153BP0C7A2 387 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 ITPKBP27987 946 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 CD86P42081 329 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 CDKN2BP42772 138 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 GNPDA1P46926 289 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 POLD2P49005 469 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 PDX1P52945 283 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 INHBCP55103 352 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 B4GALNT1Q00973 533 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 CTBSQ01459 385 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 TLE3Q04726 772 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 CDK18Q07002 472 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 ZFP36L1Q07352 338 aaKnown RBP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 ZBTB17Q13105 803 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 MAP7Q14244 749 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 FAM153CQ494X1 144 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 PYCR3Q53H96 274 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 C3orf38Q5JPI3 329 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 MFSD7Q6UXD7 560 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 PPP1R21Q6ZMI0 780 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 RFLNAQ6ZTI6 216 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 SPRED1Q7Z699 444 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 CLEC14AQ86T13 490 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 TBC1D1Q86TI0 1168 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 TRIM74Q86UV6 250 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 TRIM73Q86UV7 250 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 RFX6Q8HWS3 928 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 CCNJLQ8IV13 435 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 KATNAL2Q8IYT4 538 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 PPFIBP2Q8ND30 876 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 LPCAT1Q8NF37 534 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 ZNF398Q8TD17 642 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 DTX3LQ8TDB6 740 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 ZDHHC1Q8WTX9 485 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 UBLCP1Q8WVY7 318 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 DYDC1Q8WWB3 177 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 MAIP1Q8WWC4 291 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 TEKT5Q96M29 485 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 TRIB3Q96RU7 358 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 VAT1Q99536 393 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 RIOK2Q9BVS4 552 aaKnown RBP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 TXLNGYQ9BZA5 131 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 B3GNT4Q9C0J1 378 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 RABEP2Q9H5N1 569 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 PPCSQ9HAB8 311 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 ZFYVE1Q9HBF4 777 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 PKD2L2Q9NZM6 624 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 TAAR2Q9P1P5 351 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 NFKBIL1Q9UBC1 381 aaPredicted RBP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 FAM153AQ9UHL3 310 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 CNOT6Q9ULM6 557 aaKnown RBP7.93□□□□□ -1.14
SCN1A-207ENST00000507401 EFR3BQ9Y2G0 817 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 TTLL3Q9Y4R7 772 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 PCDHGA7Q9Y5G6 932 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 RNF215Q9Y6U7 377 aa7.93□□□□□ -1.14
SCN1A-207ENST00000507401 CACNA1GO43497 2377 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 A0A0U1RQS6 177 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TEX51A0A1B0GUA7 166 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 LOC285095A0A1B0GVY8 99 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 RHPN2P1A8MT19 583 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 GPR89AB7ZAQ6 455 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 D6RAR5 112 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 PLD2O14939 933 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 NVLO15381 856 aaKnown RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 CST8O60676 142 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TNFSF15O95150 251 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 CPNE6O95741 557 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 ITGA2BP08514 1039 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 GPR89BP0CG08 455 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 GNAZP19086 355 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 MSX1P28360 303 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms