RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 CTBSQ01459 385 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 ILF3Q12906 894 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 ACSBG2Q5FVE4 666 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 PRRT3Q5FWE3 981 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 PRAMEF14Q5SWL7 426 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 PLEKHS1Q5SXH7 462 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 XKR5Q6UX68 686 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 TRABD2AQ86V40 505 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 SRRM1Q8IYB3 904 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 CFAP206Q8IYR0 622 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 LILRA3Q8N6C8 439 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 GOLGA6L1Q8N7Z2 621 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 SUMF1Q8NBK3 374 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 CCL4L1Q8NHW4 92 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 ASZ1Q8WWH4 475 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 GLMNQ92990 594 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 TMEM159Q96B96 161 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 GSDMCQ9BYG8 508 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 STMN4Q9H169 189 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 VPS11Q9H270 941 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 SMOC1Q9H4F8 434 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 TMBIM4Q9HC24 238 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 SYTL2Q9HCH5 934 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 PCMTD2Q9NV79 361 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 TSR3Q9UJK0 312 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 ST14Q9Y5Y6 855 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 PCM1Q15154 2024 aa12.31□□□□□ -0.44
TRAPPC12-217ENST00000473348 VPS13AQ96RL7 3174 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 GOLGA4Q13439 2230 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 A0A087X1B8 175 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 SLC5A10A0PJK1 596 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 PRR19A6NJB7 356 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 GOLGA8RI6L899 631 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ATP8B1O43520 1251 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 OPA1O60313 960 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 KCNJ13O60928 360 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 GPC4O75487 556 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 PIAS2O75928 621 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 MPOP05164 745 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 RETP07949 1114 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 CELA2BP08218 269 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 DGKAP23743 735 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ATP5DP30049 168 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 NBL1P41271 181 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ACTR1BP42025 376 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ARRB1P49407 418 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 RGS4P49798 205 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ACTR1AP61163 376 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 HNRNPKP61978 463 aaKnown RBP eCLIP12.3□□□□□ -0.445e-7■■■■□ 26.5
TRAPPC12-217ENST00000473348 IRF9Q00978 393 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 C1orf61Q13536 156 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 GBX1Q14549 363 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ZNF423Q2M1K9 1284 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 PPM1JQ5JR12 505 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 PLA2G2CQ5R387 149 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 SLC30A9Q6PML9 568 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 TMEM207Q6UWW9 146 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 TBC1D1Q86TI0 1168 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 VRK3Q8IV63 474 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ZNF548Q8NEK5 533 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 GPBAR1Q8TDU6 330 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ACMSDQ8TDX5 336 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ANKRD49Q8WVL7 239 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 LINGO1Q96FE5 620 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 CABS1Q96KC9 395 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ELF4Q99607 663 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 SH3GL2Q99962 352 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 NUSAP1Q9BXS6 441 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 SPASTQ9UBP0 616 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 GMEB2Q9UKD1 530 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 TLK1Q9UKI8 766 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 CDYLQ9Y232 598 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 ACOT9Q9Y305 439 aa12.3□□□□□ -0.44
TRAPPC12-217ENST00000473348 PDZK1P1A8MUH7 402 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 EIF3FO00303 357 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 ARHGAP33O14559 1287 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 KHNYNO15037 678 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 SNX2O60749 519 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 SDC3O75056 442 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 SLCO2B1O94956 709 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 CER1O95813 267 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 SYPP08247 313 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 SLC35G4P0C7Q5 338 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 CCDC166P0CW27 439 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 CBSLP0DN79 551 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 PYGBP11216 843 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 ENO3P13929 434 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 IDSP22304 550 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 PDHA2P29803 388 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 CBSP35520 551 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 CCNFP41002 786 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 RXRGP48443 463 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 CLCNKAP51800 687 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 IL2P60568 153 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 PLOD1Q02809 727 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 RPA4Q13156 261 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 ELOCQ15369 112 aa12.29□□□□□ -0.44
TRAPPC12-217ENST00000473348 SEPT7Q16181 437 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms