RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 TMPRSS11FQ6ZWK6 438 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 CREB3L2Q70SY1 520 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 CCDC186Q7Z3E2 898 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 CRYBG2Q8N1P7 616 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 CLEC18CQ8NCF0 446 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 GOT1L1Q8NHS2 421 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 ELP5Q8TE02 316 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 SMPDL3BQ92485 455 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 FIG4Q92562 907 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 DAZLQ92904 295 aaKnown RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZBTB9Q96C00 473 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 FAM84BQ96KN1 310 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 SPATA17Q96L03 361 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 NEK1Q96PY6 1258 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 NTPCRQ9BSD7 190 aaKnown RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 SYT17Q9BSW7 474 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 DESI2Q9BSY9 194 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 ALDH8A1Q9H2A2 487 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 TCP11L1Q9NUJ3 509 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 DDX25Q9UHL0 483 aaKnown RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 NOL7Q9UMY1 257 aaKnown RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 SPIN1Q9Y657 262 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 SOS1Q07889 1333 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 FAM90A10PA6NDY2 464 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 C4orf47A7E2U8 309 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 OVOL3O00110 214 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNHIT1O43257 154 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 PAPSS2O95340 614 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 ACSL3O95573 720 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 FYNP06241 537 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 NGFRP08138 427 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 CDK4P11802 303 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 CDH1P12830 882 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 IFNAR1P17181 557 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 CBLP22681 906 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 MPZP25189 248 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 TNFRSF8P28908 595 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 HSPA4P34932 840 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 POLGP54098 1239 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 RBPJQ06330 500 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 LTBQ06643 244 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 PNRC1Q12796 327 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 HSPB3Q12988 150 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 GTF2H2Q13888 395 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 SCARB2Q14108 478 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF234Q14588 700 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 ASIC2Q16515 512 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 ARMC4Q5T2S8 1044 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 GTF2H2CQ6P1K8 395 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 SLC9B2Q86UD5 537 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 CCAR2Q8N163 923 aaKnown RBP3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 ANKRD13CQ8N6S4 541 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 RBMXL3Q8N7X1 1067 aaKnown RBP3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 ATP6V1E2Q96A05 226 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 PHF21BQ96EK2 531 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 LINGO1Q96FE5 620 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 CFAP57Q96MR6 1250 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 JAKMIP1Q96N16 626 aaKnown RBP3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 GBP5Q96PP8 586 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 SLX1AQ9BQ83 275 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 ADPGKQ9BRR6 497 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 EDEM3Q9BZQ6 932 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 MYNNQ9NPC7 610 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 VDAC3Q9Y277 283 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 LIPGQ9Y5X9 500 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 POMT1Q9Y6A1 747 aa3.73□□□□□ -1.81
HMGB1P17-201ENST00000403495 TRAV34A0A0B4J273 112 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 TEX13DA0A0J9YY54 714 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZCWPW2A0A1B0GU75 182 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 ARHGEF37A1IGU5 675 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 TMEM221A6NGB7 291 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 LILRA5A6NI73 299 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 OR10H2O60403 315 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 RECQL5O94762 991 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 TGDSO95455 350 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 RPN1P04843 607 aaKnown RBP3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 LIPFP07098 398 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 FAM106CPP0CH98 169 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 TKTP29401 623 aaKnown RBP3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 PCGF2P35227 344 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 GP5P40197 560 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 TNNT3P45378 269 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 CRKLP46109 303 aaKnown RBP3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 MMP15P51511 669 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 NANOS2P60321 138 aaKnown RBP3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 DMPKQ09013 629 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 TFCP2Q12800 502 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 SNTA1Q13424 505 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 SLC39A14Q15043 492 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 IRAK1BP1Q5VVH5 260 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 PLXDC2Q6UX71 529 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 DGLUCYQ7Z3D6 616 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 ARMC9Q7Z3E5 817 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 TMPRSS11BQ86T26 416 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 SFR1Q86XK3 245 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 KMT5CQ86Y97 462 aa3.72□□□□□ -1.81
HMGB1P17-201ENST00000403495 PTOV1Q86YD1 416 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms