RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Slitrk6Q8C110 840 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ddx52Q8K301 598 aaKnown RBP15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ace2Q8R0I0 805 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Slc5a9Q8VDT1 685 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Sec16bQ91XT4 1051 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Pcdhb4Q91XZ6 784 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Use1Q9CQ56 270 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Zfp831A2ADM8 1628 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Klhdc7bA0A286YD60 1263 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Kiaa1522A2A7S8 1013 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Fzd1O70421 642 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Impdh1P50096 514 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 MlipQ5FW52 269 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 PigaQ64323 485 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ofcc1Q8BGX4 166 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Psd4Q8BLR5 1005 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cdc73Q8JZM7 531 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Colec12Q8K4Q8 742 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Olfr809Q8VEX8 328 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Olfr371Q8VGB8 312 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Adck1Q9D0L4 525 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Dnajb4Q9D832 337 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Rnf138rt1Q9D9M9 248 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gm21885A0A286YDN8 145 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gm14781A2A9Q9 366 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Matn2O08746 956 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ifnar2O35664 513 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Rab12P35283 243 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 FynP39688 537 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Acot8P58137 320 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cyb5r2Q3KNK3 276 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 H2-Q2Q4KN81 360 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Uts2bQ765I1 113 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Slc16a9Q7TM99 508 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Mterf2Q8BKY8 385 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Smco1Q8CEZ1 214 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Klhl25Q8R2P1 589 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Asb6Q91ZU1 418 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Kcne2Q9D808 123 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Htatip2Q9Z2G9 242 aa15.35■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gm3604A0A087WPN2 559 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 CskP41241 450 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Rpl26P61255 145 aaKnown RBP15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 F8a1Q00558 380 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Fstl5Q8BFR2 847 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Pitrm1Q8K411 1036 aaKnown RBP15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Diras1Q91Z61 198 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ubqln5Q9D4I8 510 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Panx1Q9JIP4 426 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Irs2P81122 1321 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gm8444F6XS56 118 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 GhrP16882 650 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Tff2Q03404 129 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Rnf157Q3TEL6 685 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Itga2Q62469 1178 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Awat2Q6E1M8 333 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Fam110bQ8C739 366 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Rell1Q8K2J7 272 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Lrrc56Q8K375 552 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gpc1Q9QZF2 557 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Fibcd1A2AV25 459 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Adh6aE9Q5Z6 375 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Zfp946F6VWU8 523 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gm8334F7CD45 553 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 H2-T24F8VQG4 363 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 ChgbP16014 677 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Rab23P35288 237 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 ErfP70459 551 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Dusp2Q05922 318 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ints6Q6PCM2 883 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Sra1Q80VJ2 232 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Asrgl1Q8C0M9 326 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Nudt4Q8R2U6 179 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 TbccQ8VCN9 341 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 PlgrktQ9D3P8 147 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Dnaja4Q9JMC3 397 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ulk2Q9QY01 1037 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 St6galnac4Q9R2B6 360 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ttll8A4Q9F1 832 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ccdc7bE9Q9Y3 381 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Grpel2O88396 224 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gnpda1O88958 289 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cyp2a4P15392 494 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cyp2a5P20852 494 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Bmp1P98063 991 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Fads2p1Q0VAX3 487 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Trim40Q3UWA4 246 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Mthfd1lQ3V3R1 977 aaKnown RBP15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ipcef1Q5DU31 406 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Olfr664Q7TRP5 306 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ints11Q9CWS4 600 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 S100a14Q9D2Q8 104 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Trim39Q9ESN2 488 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cldn19Q9ET38 224 aa15.34■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Ikzf3O08900 507 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Anxa3O35639 323 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 LatO54957 242 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Lgals7O54974 136 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 TekQ02858 1122 aa15.33■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Gpr15Q0VDU3 360 aa15.33■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms