RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CCT8P50990 548 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 RPS24P62847 133 aaKnown RBP14.4□□□□□ -0.1
PTPN9-201ENST00000306726 FAM151BQ6UXP7 276 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 LRRC8DQ7L1W4 858 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 CARM1Q86X55 608 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 CILP2Q8IUL8 1156 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 RPL3LQ92901 407 aaKnown RBP14.4□□□□□ -0.1
PTPN9-201ENST00000306726 ADAM2Q99965 735 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 ASB1Q9Y576 335 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 PIRO00625 290 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 ALOX15P16050 662 aaPredicted RBP14.4□□□□□ -0.1
PTPN9-201ENST00000306726 SERPINB1P30740 379 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 HALP42357 657 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 CLCN5P51795 746 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 MRPS15P82914 257 aaKnown RBP14.4□□□□□ -0.1
PTPN9-201ENST00000306726 SF1Q15637 639 aaKnown RBP14.4□□□□□ -0.1
PTPN9-201ENST00000306726 DCLRE1AQ6PJP8 1040 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 OR2T12Q8NG77 320 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 SNX19Q92543 992 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 YIPF2Q9BWQ6 316 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 OLA1Q9NTK5 396 aaKnown RBP14.4□□□□□ -0.1
PTPN9-201ENST00000306726 POU2F3Q9UKI9 436 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 MKI67P46013 3256 aaKnown RBP14.4□□□□□ -0.1
PTPN9-201ENST00000306726 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.4□□□□□ -0.11
PTPN9-201ENST00000306726 PENKP01210 267 aaPredicted RBP14.4□□□□□ -0.11
PTPN9-201ENST00000306726 TCF3P15923 654 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 SELPP16109 830 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 NCS1P62166 190 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 RELAQ04206 551 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 PRKG2Q13237 762 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 MAPKAPK3Q16644 382 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 TRIM60Q495X7 471 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 DSG4Q86SJ6 1040 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 RANBP9Q96S59 729 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 VAT1Q99536 393 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 SLC30A3Q99726 388 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 PRRG3Q9BZD7 231 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 DPY30Q9C005 99 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 RBM38Q9H0Z9 239 aaKnown RBP14.4□□□□□ -0.11
PTPN9-201ENST00000306726 FARSBQ9NSD9 589 aaKnown RBP14.4□□□□□ -0.11
PTPN9-201ENST00000306726 FAM105AQ9NUU6 356 aa14.4□□□□□ -0.11
PTPN9-201ENST00000306726 ARL5CA6NH57 179 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 NPHS1O60500 1241 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 FAM20BO75063 409 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 KCNQ1P51787 676 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 HK2P52789 917 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 CCL23P55773 120 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 MCCD1P59942 119 aaPredicted RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 ZXDBP98169 803 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 MGAT3Q09327 533 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 AASDHQ4L235 1098 aaPredicted RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 ZNF621Q6ZSS3 439 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 TMEM151AQ8N4L1 468 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 ZBTB8BQ8NAP8 495 aaPredicted RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 STAG3L4Q8TBR4 150 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 EBPLQ9BY08 206 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 PCDHB9Q9Y5E1 797 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 PGLSO95336 258 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 SEC24AO95486 1093 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 SERPINF2P08697 491 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 LHX1P48742 406 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 HERVK_113P63132 956 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 CDK18Q07002 472 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 NFATC3Q12968 1075 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 SPCS2Q15005 226 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 ACAP2Q15057 778 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 PPP4R4Q6NUP7 873 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 HS6ST3Q8IZP7 471 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 ZFYVE19Q96K21 471 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 ERVK-6Q9BXR3 956 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 GTF2E2P29084 291 aaKnown RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 KCNAB2Q13303 367 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 SEMA3AQ14563 771 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 TRIM71Q2Q1W2 868 aaKnown RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 COLEC12Q5KU26 742 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 ANKRD26P1Q6NSI1 321 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 FAM180BQ6P0A1 224 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 GPRIN3Q6ZVF9 776 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 LSRQ86X29 649 aaPredicted RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 RNF175Q8N4F7 328 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 C2CD4AQ8NCU7 369 aaPredicted RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 CINPQ9BW66 212 aaPredicted RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 TDRD1Q9BXT4 1180 aaKnown RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 ACTR8Q9H981 624 aa14.39□□□□□ -0.11
PTPN9-201ENST00000306726 CCM2LQ9NUG4 571 aaPredicted RBP14.39□□□□□ -0.11
PTPN9-201ENST00000306726 APOFQ13790 326 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 DENND5AQ6IQ26 1287 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 SYVN1Q86TM6 617 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 ADGRG5Q8IZF4 528 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 OR10T2Q8NGX3 314 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 FAM210AQ96ND0 272 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 HEPHQ9BQS7 1158 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 TUBB1Q9H4B7 451 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 PALMDQ9NP74 551 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 ODC1P11926 461 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 ARCN1P48444 511 aaKnown RBP14.38□□□□□ -0.11
PTPN9-201ENST00000306726 OR8H2Q8N162 312 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 MCOLN3Q8TDD5 553 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 VRTNQ9H8Y1 702 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 SLC38A7Q9NVC3 462 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms