RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 SYNCRIPO60506 623 aaKnown RBP12.27□□□□□ -0.44
BEST3-201ENST00000266661 RSL1D1O76021 490 aaKnown RBP12.27□□□□□ -0.44
BEST3-201ENST00000266661 KLKB1P03952 638 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 CDH1P12830 882 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 NCF1P14598 390 aaPredicted RBP12.27□□□□□ -0.44
BEST3-201ENST00000266661 SMARCB1Q12824 385 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 TRAF2Q12933 501 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 PRKG2Q13237 762 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 PMS2P3Q13401 168 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 FUT11Q495W5 492 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 ABRAXAS1Q6UWZ7 409 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 IFNEQ86WN2 208 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 CLVS1Q8IUQ0 354 aaPredicted RBP12.27□□□□□ -0.44
BEST3-201ENST00000266661 CPNE9Q8IYJ1 553 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 CDYL2Q8N8U2 506 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 LEMD2Q8NC56 503 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 ZNF420Q8TAQ5 688 aaPredicted RBP12.27□□□□□ -0.44
BEST3-201ENST00000266661 OSCP1Q8WVF1 389 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 EXOC2Q96KP1 924 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 CNDP2Q96KP4 475 aaKnown RBP12.27□□□□□ -0.44
BEST3-201ENST00000266661 TOX2Q96NM4 488 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 HTATIP2Q9BUP3 242 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 HIPK3Q9H422 1215 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 CWH43Q9H720 699 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 GALNT8Q9NY28 637 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 TBX21Q9UL17 535 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 CDC14AQ9UNH5 594 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 DHRS7Q9Y394 339 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 PCDHGC4Q9Y5F7 938 aa12.27□□□□□ -0.44
BEST3-201ENST00000266661 LSM1O15116 133 aaKnown RBP12.27□□□□□ -0.45
BEST3-201ENST00000266661 CLDN11O75508 207 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 SNAP29O95721 258 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 ESR1P03372 595 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 PTGER3P43115 390 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 HLCSP50747 726 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 NUP107P57740 925 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 GRSF1Q12849 480 aaKnown RBP eCLIP12.27□□□□□ -0.45
BEST3-201ENST00000266661 DUSP4Q13115 394 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 RBBP7Q16576 425 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 NCEH1Q6PIU2 408 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 ELMSAN1Q6PJG2 1045 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 SBSNQ6UWP8 590 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 RNF165Q6ZSG1 346 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 CHST9Q7L1S5 443 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 LRRC43Q8N309 656 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 CHCHD4Q8N4Q1 142 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 DTWD1Q8N5C7 304 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 LPCAT1Q8NF37 534 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 LZICQ8WZA0 190 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 GFM2Q969S9 779 aaKnown RBP12.27□□□□□ -0.45
BEST3-201ENST00000266661 EID2BQ96D98 161 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 SEPT5Q99719 369 aaPredicted RBP12.27□□□□□ -0.45
BEST3-201ENST00000266661 SPON2Q9BUD6 331 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 CXorf21Q9HAI6 301 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 TMEM161AQ9NX61 479 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 IL17CQ9P0M4 197 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 DNMT3LQ9UJW3 386 aa12.27□□□□□ -0.45
BEST3-201ENST00000266661 IFRD1O00458 451 aaPredicted RBP12.26□□□□□ -0.45
BEST3-201ENST00000266661 ATE1O95260 518 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 GJB5O95377 273 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 CPNE6O95741 557 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 JUNBP17275 347 aaPredicted RBP12.26□□□□□ -0.45
BEST3-201ENST00000266661 GGT1P19440 569 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 JAK1P23458 1154 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 TTKP33981 857 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 ARPP19P56211 112 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 ESRRGP62508 458 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 ARF5P84085 180 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 TRAF3Q13114 568 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 MYBPC3Q14896 1274 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 GPNMBQ14956 572 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 RAB39AQ14964 217 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 C18orf21Q32NC0 220 aaPredicted RBP12.26□□□□□ -0.45
BEST3-201ENST00000266661 RTP2Q5QGT7 225 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 CCNYL2Q5T2Q4 361 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 GLYATQ6IB77 296 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 CXorf57Q6NSI4 855 aaKnown RBP12.26□□□□□ -0.45
BEST3-201ENST00000266661 CYP20A1Q6UW02 462 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 GOLGA7Q7Z5G4 137 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 OFCC1Q8IZS5 231 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 FNDC5Q8NAU1 212 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 GIPC2Q8TF65 315 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 C2orf15Q8WU43 125 aaKnown RBP12.26□□□□□ -0.45
BEST3-201ENST00000266661 NUDT8Q8WV74 236 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 CYGBQ8WWM9 190 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 BADQ92934 168 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 ZNF583Q96ND8 569 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 CCDC115Q96NT0 180 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 CASD1Q96PB1 797 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 CDK15Q96Q40 435 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 CGREF1Q99674 301 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 OSBPL6Q9BZF3 934 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 SOX17Q9H6I2 414 aaPredicted RBP12.26□□□□□ -0.45
BEST3-201ENST00000266661 CD274Q9NZQ7 290 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 MAGEL2Q9UJ55 1249 aa12.26□□□□□ -0.45
BEST3-201ENST00000266661 H3BMQ9 156 aa12.25□□□□□ -0.45
BEST3-201ENST00000266661 TULP3O75386 442 aa12.25□□□□□ -0.45
BEST3-201ENST00000266661 MT-ND1P03886 318 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms