RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CDK15Q96Q40 435 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 UGT2B28Q9BY64 529 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 SMPD4Q9NXE4 827 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 NOD1Q9Y239 953 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 SLC27A5Q9Y2P5 690 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 RAI2Q9Y5P3 530 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 ZFP37Q9Y6Q3 630 aaPredicted RBP13.12□□□□□ -0.31
SRP54-201ENST00000216774 ILVBLA1L0T0 632 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 MTMR11A4FU01 709 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
SRP54-201ENST00000216774 GOLGA8CPA6NN73 597 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 SEPT4O43236 478 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 OTCP00480 354 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 INHBBP09529 407 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 MSH3P20585 1137 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 MTPNP58546 118 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 FAM189BP81408 668 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 SMARCB1Q12824 385 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 SELPLGQ14242 412 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 NR6A1Q15406 480 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 DUS1LQ6P1R4 473 aaKnown RBP13.11□□□□□ -0.31
SRP54-201ENST00000216774 FRA10AC1Q70Z53 315 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 GOLGA7Q7Z5G4 137 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 RTN4RL1Q86UN2 441 aaPredicted RBP13.11□□□□□ -0.31
SRP54-201ENST00000216774 DCBLD1Q8N8Z6 715 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 SEPT5Q99719 369 aaPredicted RBP13.11□□□□□ -0.31
SRP54-201ENST00000216774 ING2Q9H160 280 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 P2RY12Q9H244 342 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 CHCHD3Q9NX63 227 aaKnown RBP13.11□□□□□ -0.31
SRP54-201ENST00000216774 DNMT3LQ9UJW3 386 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 FRMPD3Q5JV73 1810 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 OR7A17O14581 309 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 KCNH1O95259 989 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 F11P03951 625 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 S100BP04271 92 aaPredicted RBP13.11□□□□□ -0.31
SRP54-201ENST00000216774 YAP1P46937 504 aaKnown RBP13.11□□□□□ -0.31
SRP54-201ENST00000216774 GPR17Q13304 367 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 KCNA10Q16322 511 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 MOGQ16653 247 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 SMU1Q2TAY7 513 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 AP5B1Q2VPB7 878 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 HABP4Q5JVS0 413 aaKnown RBP13.11□□□□□ -0.31
SRP54-201ENST00000216774 FAM171A1Q5VUB5 890 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 TTC23Q5W5X9 447 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 THAP5Q7Z6K1 395 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 ITIH5Q86UX2 942 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 ZDHHC13Q8IUH4 622 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 CLEC4FQ8N1N0 589 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 TTC30BQ8N4P2 665 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 SDCCAG3Q96C92 435 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 PPP3R2Q96LZ3 170 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 ZNF583Q96ND8 569 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 SYT17Q9BSW7 474 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 PALMDQ9NP74 551 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 HPS4Q9NQG7 708 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 DHRS7Q9Y394 339 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 NEUROG3Q9Y4Z2 214 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 PCDHB1Q9Y5F3 818 aa13.11□□□□□ -0.31
SRP54-201ENST00000216774 TMX2-CTNND1H3BSU7 103 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 MAGEB3O15480 346 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 ABCB7O75027 752 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 CBFA2T3O75081 653 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 CCNA2P20248 432 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 EEF1B2P24534 225 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 ELK4P28324 431 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 POLR2IP36954 125 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 ARL1P40616 181 aaPredicted RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 MTHFRP42898 656 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 HTR6P50406 440 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 ARPP19P56211 112 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 NFATC3Q12968 1075 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 GTF2H2Q13888 395 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 KIAA0040Q15053 153 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 ANKRD26P1Q6NSI1 321 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 GTF2H2CQ6P1K8 395 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 RNF165Q6ZSG1 346 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 STK32CQ86UX6 486 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 C8orf59Q8N0T1 100 aaPredicted RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 CARNMT1Q8N4J0 409 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 OR4F6Q8NGB9 312 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 OR52E4Q8NGH9 312 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 RAB2BQ8WUD1 216 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 HDAC2Q92769 488 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 MAGED4Q96JG8 741 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 ZBTB18Q99592 522 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 NAA50Q9GZZ1 169 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 CRISPLD1Q9H336 500 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 FANCEQ9HB96 536 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 SARS2Q9NP81 518 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 TRMT13Q9NUP7 481 aaKnown RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 DNAJB9Q9UBS3 223 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 POLR3HQ9Y535 204 aaPredicted RBP13.1□□□□□ -0.31
SRP54-201ENST00000216774 PCDHGC4Q9Y5F7 938 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 GREB1Q4ZG55 1949 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 C16orf96A6NNT2 1141 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 G3V2T6 193 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 KATNA1O75449 491 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 RHOCP08134 193 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 TCF3P15923 654 aa13.1□□□□□ -0.31
SRP54-201ENST00000216774 ZNF12P17014 697 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms