RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 NACA2Q9H009 215 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 POLR1BQ9H9Y6 1135 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 HCSTQ9UBK5 93 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 TSPAN3O60637 253 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 KATNA1O75449 491 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 ATE1O95260 518 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 GJB5O95377 273 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 G6PDP11413 515 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 KPNA1P52294 538 aaPredicted RBP11.12□□□□□ -0.63
VARS2-213ENST00000625423 DGKQP52824 942 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 RAB39AQ14964 217 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 TBC1D25Q3MII6 688 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 ZIK1Q3SY52 487 aaPredicted RBP11.12□□□□□ -0.63
VARS2-213ENST00000625423 GPR107Q5VW38 600 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 DLEU7Q6UYE1 221 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 LYSMD3Q7Z3D4 306 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 OSCP1Q8WVF1 389 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 HSPBAP1Q96EW2 488 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 CIDEBQ9UHD4 219 aa11.12□□□□□ -0.63
VARS2-213ENST00000625423 ANKRD36A6QL64 1941 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 PFDN6O15212 129 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 FOXD2O60548 495 aaPredicted RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 RHOCP08134 193 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 CNPP09543 421 aaKnown RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 ATP5C1P36542 298 aaKnown RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 SLC11A2P49281 568 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 ENTPD1P49961 510 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 GPR17Q13304 367 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 TMED1Q13445 227 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 C16orf59Q7L2K0 433 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 DTWD1Q8N5C7 304 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 BPIFB1Q8TDL5 484 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 KCNJ9Q92806 393 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 BDH2Q9BUT1 245 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 OSBPL6Q9BZF3 934 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 ACTL8Q9H568 366 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 ZNF639Q9UID6 485 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 DNMT3LQ9UJW3 386 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 FAF1Q9UNN5 650 aaPredicted RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 NT5C1B-RDH14C9J2C7 533 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 RSL1D1O76021 490 aaKnown RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 F11P03951 625 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 PCNAP12004 261 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 PSMA3P25788 255 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 GATMP50440 423 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 ADARB1P78563 741 aaKnown RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 FAM189BP81408 668 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 TRAF2Q12933 501 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 MYBPC3Q14896 1274 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 NR6A1Q15406 480 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 KLHL35Q6PF15 583 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 DHRS4L2Q6PKH6 230 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 KCTD8Q6ZWB6 473 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 HIPK3Q9H422 1215 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 NTN4Q9HB63 628 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 RHBDL2Q9NX52 303 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 MAGED1Q9Y5V3 778 aaPredicted RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 ANKRD12Q6UB98 2062 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 GREB1Q4ZG55 1949 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 SLC38A8A6NNN8 435 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 NPPAP01160 153 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 CDH1P12830 882 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 ATF6P18850 670 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 CLCN4P51793 760 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 NKX3-2P78367 333 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 NEDD8Q15843 81 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 FXNQ16595 210 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 RTP2Q5QGT7 225 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 CYP20A1Q6UW02 462 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 TMEM26Q6ZUK4 368 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 USP51Q70EK9 711 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 FRA10AC1Q70Z53 315 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 RIMKLAQ8IXN7 391 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 FAM126BQ8IXS8 530 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 DPP10Q8N608 796 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 OR4F6Q8NGB9 312 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 ABTB1Q969K4 478 aaPredicted RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 NAA50Q9GZZ1 169 aaKnown RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 HEBP1Q9NRV9 189 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 PKD2L2Q9NZM6 624 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 POLR3HQ9Y535 204 aaPredicted RBP11.11□□□□□ -0.63
VARS2-213ENST00000625423 PCDHB3Q9Y5E6 796 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 COMMD10Q9Y6G5 202 aa11.11□□□□□ -0.63
VARS2-213ENST00000625423 H0Y858 1186 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 H3BMQ9 156 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ZNF701M0R085 212 aaPredicted RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 MAGEB3O15480 346 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 B4GAT1O43505 415 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ALBP02768 609 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 CLCN7P51798 805 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 ABRAXAS2Q15018 415 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 AP5B1Q2VPB7 878 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 RFTN2Q52LD8 501 aaPredicted RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 GOLGA7Q7Z5G4 137 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 CCDC97Q96F63 343 aaPredicted RBP11.1□□□□□ -0.63
VARS2-213ENST00000625423 COG8Q96MW5 612 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 MUS81Q96NY9 551 aa11.1□□□□□ -0.63
VARS2-213ENST00000625423 CGREF1Q99674 301 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms