RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 NR6A1Q15406 480 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 TMEM259Q4ZIN3 620 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 ATP6AP1LQ52LC2 224 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 FAM151BQ6UXP7 276 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 LYSMD3Q7Z3D4 306 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 TTC30BQ8N4P2 665 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 FAM86B1Q8N7N1 296 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 PCSK9Q8NBP7 692 aaKnown RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 GAB3Q8WWW8 586 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 C9orf16Q9BUW7 83 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 BRINP2Q9C0B6 783 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 FARSBQ9NSD9 589 aaKnown RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 RIMKLBQ9ULI2 386 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 PLXNA4Q9HCM2 1894 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 OR7A17O14581 309 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 NBNO60934 754 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 RASAL1O95294 804 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 SLC10A3P09131 477 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 OR1D2P34982 312 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 HSPA7P48741 367 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 CDK9P50750 372 aaKnown RBP17.48■□□□□ 0.39
XRCC3-218ENST00000557439 CLCN2P51788 898 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 IST1P53990 364 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 PTGR1Q14914 329 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 LRRC23Q53EV4 343 aaPredicted RBP17.48■□□□□ 0.39
XRCC3-218ENST00000557439 CXorf57Q6NSI4 855 aaKnown RBP17.48■□□□□ 0.39
XRCC3-218ENST00000557439 GOLGA7Q7Z5G4 137 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 SPRED1Q7Z699 444 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 SPATA17Q96L03 361 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 CHID1Q9BWS9 393 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.48■□□□□ 0.39
XRCC3-218ENST00000557439 TMEM161AQ9NX61 479 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 UTS2RQ9UKP6 389 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 VPS4BO75351 444 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 MLYCDO95822 493 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 RANBP1P43487 201 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 TTPAP49638 278 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 CLCN7P51798 805 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 ADRM1Q16186 407 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 CYBRD1Q53TN4 286 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 SGO1Q5FBB7 561 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 ANKRD34AQ69YU3 496 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 GLYATQ6IB77 296 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 FRA10AC1Q70Z53 315 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 DTWD1Q8N5C7 304 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 NAA50Q9GZZ1 169 aaKnown RBP17.48■□□□□ 0.39
XRCC3-218ENST00000557439 PDE4DIPQ5VU43 2346 aa17.48■□□□□ 0.39
XRCC3-218ENST00000557439 ZNF840PA6NDX5 716 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 TBC1D4O60343 1298 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 TCF3P15923 654 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 NKX3-2P78367 333 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 PMS2P3Q13401 168 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 GPNMBQ14956 572 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 C5orf22Q49AR2 442 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 DLEU7Q6UYE1 221 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 CARNMT1Q8N4J0 409 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 FBXO22Q8NEZ5 403 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 GLT1D1Q96MS3 346 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 APOL5Q9BWW9 433 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 NUSAP1Q9BXS6 441 aaKnown RBP17.47■□□□□ 0.39
XRCC3-218ENST00000557439 ABCG8Q9H221 673 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 CARS2Q9HA77 564 aaKnown RBP17.47■□□□□ 0.39
XRCC3-218ENST00000557439 PCDHB7Q9Y5E2 793 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 CASP8AP2Q9UKL3 1982 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 KLHL33A6NCF5 533 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 MOXD2PA6NHM9 499 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 SEC24AO95486 1093 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 GPIP06744 558 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 CYP20A1Q6UW02 462 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 MBOAT1Q6ZNC8 495 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 ZFAND4Q86XD8 727 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 PTRH1Q86Y79 214 aaKnown RBP17.47■□□□□ 0.39
XRCC3-218ENST00000557439 HM13Q8TCT9 377 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 WFDC5Q8TCV5 224 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 C1QTNF3Q9BXJ4 246 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 ELOVL2Q9NXB9 296 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 PRSS21Q9Y6M0 314 aa17.47■□□□□ 0.39
XRCC3-218ENST00000557439 CA12O43570 354 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 DFNA5O60443 496 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 CLDN11O75508 207 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 GALTP07902 379 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 ELK4P28324 431 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 RPS9P46781 194 aaKnown RBP17.46■□□□□ 0.39
XRCC3-218ENST00000557439 EMP3P54852 163 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 HMGCS1Q01581 520 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 FOXM1Q08050 763 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 PRKG2Q13237 762 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 AP5B1Q2VPB7 878 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 PDCD4Q53EL6 469 aaKnown RBP17.46■□□□□ 0.39
XRCC3-218ENST00000557439 TMTC4Q5T4D3 741 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 SBSNQ6UWP8 590 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 GPR141Q7Z602 305 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 RNF180Q86T96 592 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 DHRSXQ8N5I4 330 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 ISOC1Q96CN7 298 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 GPR63Q9BZJ6 419 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 CIPCQ9C0C6 399 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 ZFP14Q9HCL3 533 aa17.46■□□□□ 0.39
XRCC3-218ENST00000557439 SMPD3Q9NY59 655 aaPredicted RBP17.46■□□□□ 0.39
XRCC3-218ENST00000557439 FAM234BA2RU67 622 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms