RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GPR34Q9UPC5 381 aa9.73□□□□□ -0.85
CLN8-202ENST00000517514 CDYLQ9Y232 598 aa9.73□□□□□ -0.85
CLN8-202ENST00000517514 NFS1Q9Y697 457 aa9.73□□□□□ -0.85
CLN8-202ENST00000517514 EP300Q09472 2414 aaPredicted RBP9.73□□□□□ -0.85
CLN8-202ENST00000517514 A0A087WUV0 522 aaPredicted RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 UBA6A0AVT1 1052 aaPredicted RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 CCDC151A5D8V7 595 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 A6NCN8 305 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 KMOO15229 486 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 SDC3O75056 442 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 LRP3O75074 770 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 WISP3O95389 354 aaPredicted RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 TNFP01375 233 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 TUBBP07437 444 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 ACP5P13686 325 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 PKMP14618 531 aaKnown RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 ITGB6P18564 788 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 DGKAP23743 735 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 MCM3P25205 808 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 EPHA8P29322 1005 aaPredicted RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 PMLP29590 882 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CCR7P32248 378 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 GMPRP36959 345 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CD151P48509 253 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CSRP3P50461 194 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CLCN7P51798 805 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CLCNKAP51800 687 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CSE1LP55060 971 aaKnown RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 CDKN2DP55273 166 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 ARHGAP8P85298 464 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CTBSQ01459 385 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 DMPKQ09013 629 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 NFE2L1Q14494 772 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 GBX1Q14549 363 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 BRD3Q15059 726 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 RNF187Q5TA31 235 aaPredicted RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 CHST15Q7LFX5 561 aaPredicted RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 LRRC6Q86X45 466 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 GATAD2AQ86YP4 633 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 GALNT13Q8IUC8 556 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 TRAPPC5Q8IUR0 188 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 MINDY1Q8N5J2 469 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 ZNF548Q8NEK5 533 aaPredicted RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 UBLCP1Q8WVY7 318 aaPredicted RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 SLC44A1Q8WWI5 657 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 DCUN1D1Q96GG9 259 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CYTH2Q99418 400 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 NDNQ99608 321 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 RBBP8Q99708 897 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CPNE1Q99829 537 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 TIMM29Q9BSF4 260 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 CCM2Q9BSQ5 444 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 NUSAP1Q9BXS6 441 aaKnown RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 ZDHHC5Q9C0B5 715 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 RHOJQ9H4E5 214 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 GAREM1Q9H706 876 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 LATS2Q9NRM7 1088 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 TRNAU1APQ9NX07 287 aaKnown RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 NCDNQ9UBB6 729 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 APOBEC3BQ9UH17 382 aaKnown RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 KCNK6Q9Y257 313 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 MTO1Q9Y2Z2 717 aaKnown RBP9.72□□□□□ -0.85
CLN8-202ENST00000517514 GPSM3Q9Y4H4 160 aa9.72□□□□□ -0.85
CLN8-202ENST00000517514 SPEGQ15772 3267 aa9.71□□□□□ -0.85
CLN8-202ENST00000517514 CFAP54Q96N23 3096 aa9.71□□□□□ -0.85
CLN8-202ENST00000517514 SLC5A10A0PJK1 596 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 MGAT4DA6NG13 374 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 CFAP99D6REC4 459 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 GDF9O60383 454 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 GPC4O75487 556 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 ESR1P03372 595 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 SYPP08247 313 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 NUDT17P0C025 328 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 BRAFP15056 766 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 FDXRP22570 491 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 AOAHP28039 575 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 PDHA2P29803 388 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 PBLDP30039 288 aaPredicted RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 PHBP35232 272 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 GP5P40197 560 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 LIMK2P53671 638 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 TAS2R39P59534 338 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 HNRNPKP61978 463 aaKnown RBP eCLIP9.71□□□□□ -0.86
CLN8-202ENST00000517514 NAB1Q13506 487 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 GTF2H3Q13889 308 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 PRRT3Q5FWE3 981 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 HECTD2Q5U5R9 776 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 FBXO38Q6PIJ6 1188 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 TMEM207Q6UWW9 146 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 DBX2Q6ZNG2 339 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 PRR23CQ6ZRP0 262 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 PIM3Q86V86 326 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 VRK3Q8IV63 474 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 CEP97Q8IW35 865 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 CTAGE3PQ8IX95 158 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 IQCKQ8N0W5 287 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 OR2L2Q8NH16 312 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 MZB1Q8WU39 189 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 HNRNPLLQ8WVV9 542 aaKnown RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 SKA1Q96BD8 255 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms