RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 Q8N9G6 341 aaPredicted RBP20.13■□□□□ 0.81
VARS-224ENST00000479051 BBOF1Q8ND07 529 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 MFSD3Q96ES6 412 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 SNF8Q96H20 258 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 GFM1Q96RP9 751 aaKnown RBP20.13■□□□□ 0.81
VARS-224ENST00000479051 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.13■□□□□ 0.81
VARS-224ENST00000479051 SARS2Q9NP81 518 aaKnown RBP20.13■□□□□ 0.81
VARS-224ENST00000479051 MAD1L1Q9Y6D9 718 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 FAM237BA0A1B0GVD1 139 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 EFCAB8A8MWE9 144 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 CD3EAPO15446 510 aaKnown RBP20.12■□□□□ 0.81
VARS-224ENST00000479051 EML2O95834 649 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 RPLP0P05388 317 aaKnown RBP20.12■□□□□ 0.81
VARS-224ENST00000479051 OR56A5P0C7T3 313 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 C2orf54Q08AI8 447 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 TUBB2AQ13885 445 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 WHAMMP3Q1A5X7 153 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 CDCP2Q5VXM1 449 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 KIAA0930Q6ICG6 404 aaPredicted RBP20.12■□□□□ 0.81
VARS-224ENST00000479051 MRNIPQ6NTE8 343 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 ABRAXAS1Q6UWZ7 409 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 CCNI2Q6ZMN8 369 aaPredicted RBP20.12■□□□□ 0.81
VARS-224ENST00000479051 SPRED1Q7Z699 444 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 HM13Q8TCT9 377 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 SLC38A3Q99624 504 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 CCM2Q9BSQ5 444 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 TUBB2BQ9BVA1 445 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 LRRN3Q9H3W5 708 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 RABGEF1Q9UJ41 708 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 ACSL5Q9ULC5 683 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 BPTFQ12830 3046 aa20.12■□□□□ 0.81
VARS-224ENST00000479051 C17orf113A0A1B0GUU1 675 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 FAM149AA5PLN7 773 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 PRR19A6NJB7 356 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 VAPBO95292 243 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 VIPP01282 170 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 FTH1P02794 183 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 IVDP26440 423 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 RPL10P27635 214 aaKnown RBP20.11■□□□□ 0.81
VARS-224ENST00000479051 ALDH4A1P30038 563 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 MAGEA3P43357 314 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 PPM1FP49593 454 aaPredicted RBP20.11■□□□□ 0.81
VARS-224ENST00000479051 CCL7P80098 99 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 TARDBPQ13148 414 aaKnown RBP eCLIP20.11■□□□□ 0.81
VARS-224ENST00000479051 NFE2L1Q14494 772 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 NR1D2Q14995 579 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 CES3Q6UWW8 571 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 ZNF572Q7Z3I7 529 aaPredicted RBP20.11■□□□□ 0.81
VARS-224ENST00000479051 SDCCAG8Q86SQ7 713 aaPredicted RBP20.11■□□□□ 0.81
VARS-224ENST00000479051 PDIK1LQ8N165 341 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 DCBLD1Q8N8Z6 715 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 ZNF669Q96BR6 464 aaPredicted RBP20.11■□□□□ 0.81
VARS-224ENST00000479051 GRAMD1AQ96CP6 724 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 CXorf40BQ96DE9 158 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 STAMBPL1Q96FJ0 436 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 TSSK1BQ9BXA7 367 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 TRIM31Q9BZY9 425 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 CPNE7Q9UBL6 633 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 RPS6KL1Q9Y6S9 549 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 PTPRBP23467 1997 aa20.11■□□□□ 0.81
VARS-224ENST00000479051 ASXL3Q9C0F0 2248 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 NTN3O00634 580 aaPredicted RBP20.1■□□□□ 0.81
VARS-224ENST00000479051 PPM1DO15297 605 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 SGTAO43765 313 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 SEC31AO94979 1220 aaKnown RBP20.1■□□□□ 0.81
VARS-224ENST00000479051 XRCC1P18887 633 aaPredicted RBP20.1■□□□□ 0.81
VARS-224ENST00000479051 DRG2P55039 364 aaKnown RBP20.1■□□□□ 0.81
VARS-224ENST00000479051 CLDN6P56747 220 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 CALCOCO2Q13137 446 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 ANKRD20A4Q4UJ75 823 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 RNF187Q5TA31 235 aaPredicted RBP20.1■□□□□ 0.81
VARS-224ENST00000479051 METRNLQ641Q3 311 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 MICALCLQ6ZW33 695 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 CFAP206Q8IYR0 622 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 CLDN19Q8N6F1 224 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 NAT14Q8WUY8 206 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 CCDC97Q96F63 343 aaPredicted RBP20.1■□□□□ 0.81
VARS-224ENST00000479051 AHCYL2Q96HN2 611 aaKnown RBP20.1■□□□□ 0.81
VARS-224ENST00000479051 NAT9Q9BTE0 207 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 POT1Q9NUX5 634 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 KCNK4Q9NYG8 393 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 FAM8A1Q9UBU6 413 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 RP1P56715 2156 aa20.1■□□□□ 0.81
VARS-224ENST00000479051 TMX2-CTNND1H3BSU7 103 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 CSO75390 466 aaKnown RBP20.09■□□□□ 0.81
VARS-224ENST00000479051 NDUFS3O75489 264 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 USP1O94782 785 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 POLBP06746 335 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 SLC35G4P0C7Q5 338 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 ITGA8P53708 1063 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 OR1D5P58170 312 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 GPLD1P80108 840 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 CLPPQ16740 277 aaPredicted RBP20.09■□□□□ 0.81
VARS-224ENST00000479051 MAP9Q49MG5 647 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.09■□□□□ 0.81
VARS-224ENST00000479051 HIBCHQ6NVY1 386 aaPredicted RBP20.09■□□□□ 0.81
VARS-224ENST00000479051 FAM83HQ6ZRV2 1179 aaPredicted RBP20.09■□□□□ 0.81
VARS-224ENST00000479051 TMEM135Q86UB9 458 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 RBM12BQ8IXT5 1001 aaKnown RBP20.09■□□□□ 0.81
VARS-224ENST00000479051 OR10G6Q8NH81 332 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms