RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 KIAA1191Q96A73 305 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 ADAM2Q99965 735 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 TFB2MQ9H5Q4 396 aaKnown RBP12.25□□□□□ -0.45
CHMP3-201ENST00000263856 ANGPTL3Q9Y5C1 460 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 TRPV2Q9Y5S1 764 aa12.25□□□□□ -0.45
CHMP3-201ENST00000263856 VPS26AO75436 327 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 UROSP10746 265 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 PLA2G16P53816 162 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ERVK-8P63133 956 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 NFKB2Q00653 900 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 HMGCS1Q01581 520 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 OCA2Q04671 838 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 GTF2H3Q13889 308 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 SPIDRQ14159 915 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 SPCS2Q15005 226 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 SLC14A2Q15849 920 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 AP5B1Q2VPB7 878 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 GTDC1Q4AE62 458 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 LETMD1Q6P1Q0 360 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 DHRS4L2Q6PKH6 230 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 LGI2Q8N0V4 545 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ZNF420Q8TAQ5 688 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 AURKBQ96GD4 344 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 COMMD8Q9NX08 183 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 MARCH2Q9P0N8 246 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 PCDHB3Q9Y5E6 796 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 PCDHGA11Q9Y5H2 935 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 MYO1GB0I1T2 1018 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 EEDO75530 441 aaKnown RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 PAPSS2O95340 614 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ESRRBO95718 433 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 MBL2P11226 248 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 MC4RP32245 332 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 OPRL1P41146 370 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 GDF5P43026 501 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 BCAP31P51572 246 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 VAC14Q08AM6 782 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 TWF1Q12792 350 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 FAM117BQ6P1L5 589 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 SPATA19Q7Z5L4 167 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 IGFN1Q86VF2 1251 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ANKRD46Q86W74 232 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 HID1Q8IV36 788 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 PIANPQ8IYJ0 282 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ATP6V0D2Q8N8Y2 350 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 OR2T12Q8NG77 320 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 CNIH3Q8TBE1 160 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 BRSK1Q8TDC3 778 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 CARS2Q9HA77 564 aaKnown RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 PCTPQ9UKL6 214 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 PADI3Q9ULW8 664 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 TANC1Q9C0D5 1861 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 A8MX80 341 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ARVCFO00192 962 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 CBX4O00257 560 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 INMTO95050 263 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 FGF1P05230 155 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 FSHRP23945 695 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 HOXC13P31276 330 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 RGRP47804 291 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ALDH3A2P51648 485 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ERVPABLB-1P60509 514 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ADAM17P78536 824 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 SIM2Q14190 667 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 MOGQ16653 247 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 GDF6Q6KF10 455 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 FRS2Q8WU20 508 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 ZNF599Q96NL3 588 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 CSF3RQ99062 836 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 CINPQ9BW66 212 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 FUNDC2Q9BWH2 189 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 POLE4Q9NR33 117 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 HACD3Q9P035 362 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 VAPAQ9P0L0 249 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 PNMA8BQ9ULN7 279 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-201ENST00000263856 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
CHMP3-201ENST00000263856 TLR5O60602 858 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 CHRNA1P02708 482 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 FTH1P02794 183 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 CDH1P12830 882 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 HOXD8P13378 290 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-201ENST00000263856 HSPA7P48741 367 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 CD97P48960 835 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 HK3P52790 923 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 EEFSECP57772 596 aaKnown RBP12.23□□□□□ -0.45
CHMP3-201ENST00000263856 IL2P60568 153 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 ADARB1P78563 741 aaKnown RBP12.23□□□□□ -0.45
CHMP3-201ENST00000263856 KCNAB2Q13303 367 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 DNASE1L3Q13609 305 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 FAM174BQ3ZCQ3 159 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 RFTN2Q52LD8 501 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-201ENST00000263856 CYP20A1Q6UW02 462 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 UMODL1-AS1Q8N2C9 162 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 OR13F1Q8NGS4 319 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 CDC26Q8NHZ8 85 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 GIPC2Q8TF65 315 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 SLC22A17Q8WUG5 538 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 SLC47A1Q96FL8 570 aa12.23□□□□□ -0.45
CHMP3-201ENST00000263856 CGREF1Q99674 301 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms