RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NAA15Q9BXJ9 866 aaKnown RBP8.95□□□□□ -0.98
NUP54-211ENST00000512151 RRAGDQ9NQL2 400 aaPredicted RBP8.95□□□□□ -0.98
NUP54-211ENST00000512151 DLL4Q9NR61 685 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 EPHA6Q9UF33 1036 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 CNOT6Q9ULM6 557 aaKnown RBP8.95□□□□□ -0.98
NUP54-211ENST00000512151 FHOD1Q9Y613 1164 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 COL6A5A8TX70 2615 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 FLNAP21333 2647 aaKnown RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 AKAP6Q13023 2319 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 ESPNB1AK53 854 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 MEN1O00255 615 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 CCL21O00585 134 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 PCDH17O14917 1159 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 GRID2O43424 1007 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 HTRA2O43464 458 aaPredicted RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 ASMTLO95671 621 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 PNMA6AP0CW24 399 aaPredicted RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 XRCC1P18887 633 aaPredicted RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 KLK2P20151 261 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 RORAP35398 523 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 SCNN1AP37088 669 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 YBEYP58557 167 aaPredicted RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 POLR2LP62875 67 aaKnown RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 PARP15Q460N3 678 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 ZNF324BQ6AW86 544 aaPredicted RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 TMEM126BQ8IUX1 230 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 UMODL1-AS1Q8N2C9 162 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 PAF1Q8N7H5 531 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 ACBD4Q8NC06 268 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 CELF6Q96J87 481 aaKnown RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 TRIM5Q9C035 493 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 LRRC19Q9H756 370 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 APEX2Q9UBZ4 518 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 DNAJC12Q9UKB3 198 aa8.94□□□□□ -0.98
NUP54-211ENST00000512151 RPH3AQ9Y2J0 694 aaPredicted RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 NSD1Q96L73 2696 aaPredicted RBP8.94□□□□□ -0.98
NUP54-211ENST00000512151 TRGV8A0A0C4DH27 118 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 FAM221AA4D161 298 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 OR5K4A6NMS3 321 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 DDX3YO15523 660 aaKnown RBP8.93□□□□□ -0.98
NUP54-211ENST00000512151 CBFA2T2O43439 604 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 LCA5LO95447 670 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 JCHAINP01591 159 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 SLC2A4P14672 509 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 EPHB2P29323 1055 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 SCNN1BP51168 640 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 SNX16P57768 344 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 FOXL2P58012 376 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 ACY1Q03154 408 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 LTBQ06643 244 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 CETN1Q12798 172 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 ABRQ12979 859 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 CDC16Q13042 620 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 GPR18Q14330 331 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 PTCHD3Q3KNS1 767 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 CCDC14Q49A88 953 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 RPTNQ6XPR3 784 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 ARHGAP36Q6ZRI8 547 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 Q71RC1 249 aaPredicted RBP8.93□□□□□ -0.98
NUP54-211ENST00000512151 VSTM4Q8IW00 320 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 CEP97Q8IW35 865 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 LZTR1Q8N653 840 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 PPP4R1Q8TF05 950 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 TM9SF4Q92544 642 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 NRGNQ92686 78 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 AP2M1Q96CW1 435 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 ZNF501Q96CX3 271 aaPredicted RBP8.93□□□□□ -0.98
NUP54-211ENST00000512151 C18orf8Q96DM3 657 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 ZDHHC12Q96GR4 267 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 MRFAP1L1Q96HT8 127 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 PCMTD1Q96MG8 357 aaPredicted RBP8.93□□□□□ -0.98
NUP54-211ENST00000512151 LRFN5Q96NI6 719 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 MAP3K3Q99759 626 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 TMEM121Q9BTD3 319 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 KCND1Q9NSA2 647 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 FAM207AQ9NSI2 230 aaPredicted RBP8.93□□□□□ -0.98
NUP54-211ENST00000512151 OLAHQ9NV23 265 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 TMEM51Q9NW97 253 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 KCTD5Q9NXV2 234 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 SUCOQ9UBS9 1254 aaKnown RBP8.93□□□□□ -0.98
NUP54-211ENST00000512151 PCDHGC4Q9Y5F7 938 aa8.93□□□□□ -0.98
NUP54-211ENST00000512151 PSMD11O00231 422 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 PALMO75781 387 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 KLF7O75840 302 aaPredicted RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 CPP00450 1065 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 VIPP01282 170 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 KLK3P07288 261 aaPredicted RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 BRAFP15056 766 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 UCHL3P15374 230 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 CTPS1P17812 591 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 PAPOLAP51003 745 aaKnown RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 JAM2P57087 298 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 GSDMDP57764 484 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 POLR2FP61218 127 aaKnown RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 TUBB4BP68371 445 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 TRAF2Q12933 501 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 FOXD4Q12950 439 aaPredicted RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 TBX2Q13207 712 aaPredicted RBP8.92□□□□□ -0.98
NUP54-211ENST00000512151 TUBB2AQ13885 445 aa8.92□□□□□ -0.98
NUP54-211ENST00000512151 ZNF169Q14929 603 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms