RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 PCDH18Q9HCL0 1135 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PDE7BQ9NP56 450 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 KLC4Q9NSK0 619 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 ETNK2Q9NVF9 386 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 RBM22Q9NW64 420 aaKnown RBP eCLIP8.99□□□□□ -0.972e-6■■□□□ 13.7
CPSF4-211ENST00000471455 IP6K2Q9UHH9 426 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PADI1Q9ULC6 663 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 CHKBQ9Y259 395 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PRKAB1Q9Y478 270 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PCDHGA6Q9Y5G7 932 aa8.99□□□□□ -0.97
CPSF4-211ENST00000471455 PIPSLA2A3N6 862 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 GOLGA6L3A6NEY3 463 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 KMOO15229 486 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 MFSD11O43934 449 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 CREG1O75629 220 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 KIAA0754O94854 1291 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 SLC25A14O95258 325 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 CLDN7O95471 211 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 KRT7P08729 469 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 FGF5P12034 268 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 CCNCP24863 283 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 SSR1P43307 286 aaKnown RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 GFERP55789 205 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 DCDC1P59894 354 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 PDE1BQ01064 536 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 DSC2Q02487 901 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 DNASE1L3Q13609 305 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 ERV3-1Q14264 604 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 PTPRRQ15256 657 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 TDRD12Q587J7 1177 aaKnown RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 TBCELQ5QJ74 424 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 CCDC183Q5T5S1 534 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 ATP1A1-AS1Q5TC04 95 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 RBM43Q6ZSC3 357 aaKnown RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 ZNF571Q7Z3V5 609 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 LRRTM4Q86VH4 590 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 APLFQ8IW19 511 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 MAP7D3Q8IWC1 876 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 THAP4Q8WY91 577 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 CXorf40BQ96DE9 158 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 FCRL4Q96PJ5 515 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 TSGA13Q96PP4 275 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 PLEKHG4BQ96PX9 1271 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 SRPK1Q96SB4 655 aaKnown RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 ZNF670Q9BS34 389 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 TIMM29Q9BSF4 260 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 SPATA16Q9BXB7 569 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 GPR87Q9BY21 358 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 OR2AG1Q9H205 316 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 TRIM39Q9HCM9 518 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 AIPL1Q9NZN9 384 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 LCMT1Q9UIC8 334 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 CNOT6Q9ULM6 557 aaKnown RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 MRPS18BQ9Y676 258 aaKnown RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 OAS3Q9Y6K5 1087 aaKnown RBP8.98□□□□□ -0.97
CPSF4-211ENST00000471455 UNC79Q9P2D8 2635 aa8.98□□□□□ -0.97
CPSF4-211ENST00000471455 ICE1Q9Y2F5 2266 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 A0A0U1RQS6 177 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 FADS2P1A8MWK0 482 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 ANKRD66B4E2M5 251 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 MYO1FO00160 1098 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 DDX3XO00571 662 aaKnown RBP eCLIP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 VEGFDO43915 354 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 ZNF8P17098 575 aaPredicted RBP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 TYRP1P17643 537 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 IDSP22304 550 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 HALP42357 657 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 ARL4DP49703 201 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 SEPHS1P49903 392 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 PGDP52209 483 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 MLLT10P55197 1068 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 RPS15P62841 145 aaKnown RBP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 SLC25A11Q02978 314 aaKnown RBP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 ACY1Q03154 408 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 SRSF11Q05519 484 aaKnown RBP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 GTF2H3Q13889 308 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 PAFAH1B3Q15102 231 aaKnown RBP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 PDK2Q15119 407 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 CACHD1Q5VU97 1274 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 CRTC3Q6UUV7 619 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 HPS6Q86YV9 775 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 TRAM1L1Q8N609 369 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 UBXN4Q92575 508 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 GLYATL1Q969I3 302 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 SLC29A3Q9BZD2 475 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 XPO4Q9C0E2 1151 aaKnown RBP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 BRD8Q9H0E9 1235 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 ISCUQ9H1K1 167 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 ZFYVE1Q9HBF4 777 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 ATXN10Q9UBB4 475 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 NFKBIL1Q9UBC1 381 aaPredicted RBP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 EPHA6Q9UF33 1036 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 ANAPC7Q9UJX3 599 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 TLK1Q9UKI8 766 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 RARRES3Q9UL19 164 aa8.97□□□□□ -0.97
CPSF4-211ENST00000471455 BZW2Q9Y6E2 419 aaKnown RBP8.97□□□□□ -0.97
CPSF4-211ENST00000471455 CREBBPQ92793 2442 aa8.96□□□□□ -0.97
CPSF4-211ENST00000471455 COL12A1Q99715 3063 aa8.96□□□□□ -0.97
CPSF4-211ENST00000471455 TEX15Q9BXT5 2789 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms