RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TSSK3Q96PN8 268 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 NSUN3Q9H649 340 aaKnown RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 CREBZFQ9NS37 354 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 COMMD8Q9NX08 183 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 SUCOQ9UBS9 1254 aaKnown RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 TMEM189-UBE2V1I3L0A0 370 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 HNRNPRO43390 633 aaKnown RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 NBNO60934 754 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 ESRRBO95718 433 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 SLC7A1P30825 629 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 ST8SIA6P61647 398 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 VAC14Q08AM6 782 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 TGFBIQ15582 683 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 NEDD8Q15843 81 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 PPP3R2Q96LZ3 170 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 CNOT6Q9ULM6 557 aaKnown RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 INVSQ9Y283 1065 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 PCDHB1Q9Y5F3 818 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 SNX5Q9Y5X3 404 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 PLXNA1Q9UIW2 1896 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 TRAV19A0A0A6YYK7 116 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 DRGXA6NNA5 263 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 ZNF197O14709 1029 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 FFAR2O15552 330 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 GSNP06396 782 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 ATF6P18850 670 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 PRDX3P30048 256 aaKnown RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 ROR2Q01974 943 aaKnown RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 GLYATQ6IB77 296 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 CLVS1Q8IUQ0 354 aaPredicted RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 ZNF555Q8NEP9 628 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 LINC01599Q8WXQ3 324 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 SPATA17Q96L03 361 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 BBS2Q9BXC9 721 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 ASPSCR1Q9BZE9 553 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 SMIM31A0A1B0GVY4 71 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 KCNH1O95259 989 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 PARNO95453 639 aaKnown RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 HOXC8P31273 242 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 S100A3P33764 101 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 PPM1FP49593 454 aaPredicted RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 TMEM207Q6UWW9 146 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 OTOP2Q7RTS6 562 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 MDGA1Q8NFP4 955 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 GATA6Q92908 595 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 UBXN10Q96LJ8 280 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 FOPNLQ96NB1 174 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 KLHL32Q96NJ5 620 aa11.06□□□□□ -0.64
SSU72-202ENST00000359060 ZNF490Q9ULM2 529 aaPredicted RBP11.06□□□□□ -0.64
SSU72-202ENST00000359060 KNL1Q8NG31 2342 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 A0A1W2PRU2 124 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 NEDD8-MDP1E9PL57 170 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 AP1S1P61966 158 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 PLCL1Q15111 1095 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 ZNF284Q2VY69 593 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 CNPY1Q3B7I2 92 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.05□□□□□ -0.642e-7■■□□□ 11.4
SSU72-202ENST00000359060 EP400NLQ6ZTU2 488 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 SYVN1Q86TM6 617 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 OFCC1Q8IZS5 231 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 OR52B6Q8NGF0 335 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 MCOLN3Q8TDD5 553 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 IGSF21Q96ID5 467 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 CASD1Q96PB1 797 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 PKMYT1Q99640 499 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 EMILIN2Q9BXX0 1053 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 TNFRSF12AQ9NP84 129 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 NUDT4Q9NZJ9 180 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 KIAA1522Q9P206 1035 aaPredicted RBP11.05□□□□□ -0.64
SSU72-202ENST00000359060 KIF17Q9P2E2 1029 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 PCDHGA7Q9Y5G6 932 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 TBC1D4O60343 1298 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 OR6B1O95007 311 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 MMP2P08253 660 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 MSH3P20585 1137 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 ITPKAP23677 461 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 HOXD9P28356 352 aaPredicted RBP11.05□□□□□ -0.64
SSU72-202ENST00000359060 TM4SF4P48230 202 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 NR1H2P55055 460 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 CHRNA6Q15825 494 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 ADRM1Q16186 407 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 SZRD1Q7Z422 152 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 ZBTB2Q8N680 514 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 ELMO1Q92556 727 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 MGME1Q9BQP7 344 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 SMG9Q9H0W8 520 aaKnown RBP11.05□□□□□ -0.64
SSU72-202ENST00000359060 ATG10Q9H0Y0 220 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 GMPR2Q9P2T1 348 aaKnown RBP11.05□□□□□ -0.64
SSU72-202ENST00000359060 PCDHGB4Q9UN71 923 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 TBC1D30Q9Y2I9 924 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 PCNTO95613 3336 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 MROH6A6NGR9 719 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 KPNA3O00505 521 aaPredicted RBP11.05□□□□□ -0.64
SSU72-202ENST00000359060 WDR47O94967 919 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 MAPK8P45983 427 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 GSK3BP49841 420 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 ERVK-8P63133 956 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 PHEXP78562 749 aa11.05□□□□□ -0.64
SSU72-202ENST00000359060 MAD2L1Q13257 205 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms