RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 IPPKQ9H8X2 491 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 SCN3BQ9NY72 215 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 VPS4AQ9UN37 437 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 TRIM17Q9Y577 477 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 CASP8AP2Q9UKL3 1982 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 RAD51BO15315 384 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 DIRAS1O95057 198 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 FGF1P05230 155 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 OR1D2P34982 312 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 MAGEA3P43357 314 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 HERVK_113P63132 956 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 MYBPC1Q00872 1141 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 KLHL35Q6PF15 583 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 KIAA0408Q6ZU52 694 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 ZNF280BQ86YH2 543 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 AHI1Q8N157 1196 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 ZCCHC7Q8N3Z6 543 aaKnown RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 SFRP1Q8N474 314 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 DACT3Q96B18 629 aaPredicted RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 CDKN2AIPNLQ96HQ2 116 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 OR52E6Q96RD3 313 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 ERVK-6Q9BXR3 956 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 RAI2Q9Y5P3 530 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 TRIP11Q15643 1979 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 ECI2O75521 394 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 CDK14O94921 469 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 SNAP29O95721 258 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 CDK4P11802 303 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 GRIA2P42262 883 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 MAGEA6P43360 314 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 COL9A2Q14055 689 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 PTPRRQ15256 657 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 FAM174BQ3ZCQ3 159 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 OGFRL1Q5TC84 451 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 GALNT18Q6P9A2 607 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 CENPNQ96H22 339 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 NDEL1Q9GZM8 345 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 ZFP37Q9Y6Q3 630 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 UPK3BL1B0FP48 263 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 UPK3BL2E5RIL1 263 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 B4GAT1O43505 415 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 DLGAP3O95886 979 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 TFAP2AP05549 437 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 RHOQP17081 205 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 S100A3P33764 101 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 TRPC1P48995 793 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 ZNF135P52742 658 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 SMYD5Q6GMV2 418 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 UGT3A1Q6NUS8 523 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 PRSS55Q6UWB4 352 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 EID3Q8N140 333 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 AURKBQ96GD4 344 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 BTN2A3PQ96KV6 586 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 SLC2A13Q96QE2 648 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 HOPXQ9BPY8 73 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 PLGRKTQ9HBL7 147 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 FCF1Q9Y324 198 aaKnown RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 DNAJC15Q9Y5T4 150 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 UNCXA6NJT0 531 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 SLC7A4O43246 635 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 C1RP00736 705 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 IL7RP16871 459 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 ZNF7P17097 686 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 HLA-DPA1P20036 260 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 CCNA2P20248 432 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 VARSP26640 1264 aaKnown RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 DPP6P42658 865 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 CDKN1CP49918 316 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 TNK2Q07912 1038 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 TUBB3Q13509 450 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 CRY1Q16526 586 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 TECRLQ5HYJ1 363 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 PGM2L1Q6PCE3 622 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 UGT2A3Q6UWM9 527 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 RNF111Q6ZNA4 994 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 CROCCP3Q8IVE0 287 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 NKAPQ8N5F7 415 aaKnown RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 EEF1AKMT1Q8WVE0 214 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 RORBQ92753 470 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 CIPCQ9C0C6 399 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 PCDH12Q9NPG4 1184 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 INTS7Q9NVH2 962 aaKnown RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 TUBA8Q9NY65 449 aaPredicted RBP13.91□□□□□ -0.18
SDC2-201ENST00000302190 VPS9D1Q9Y2B5 631 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 TMED5Q9Y3A6 229 aa13.91□□□□□ -0.18
SDC2-201ENST00000302190 SNAP91O60641 907 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 ALPIP09923 528 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 ZNF182P17025 639 aaPredicted RBP13.9□□□□□ -0.18
SDC2-201ENST00000302190 ITPKAP23677 461 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 SCNN1AP37088 669 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 CLCN2P51788 898 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 VARS2Q5ST30 1063 aaKnown RBP13.9□□□□□ -0.18
SDC2-201ENST00000302190 C6orf183Q5T699 404 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 GPR156Q8NFN8 814 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 IGSF8Q969P0 613 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 ATG10Q9H0Y0 220 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 EBF1Q9UH73 591 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 CFAP99D6REC4 459 aa13.9□□□□□ -0.18
SDC2-201ENST00000302190 KPNA6O60684 536 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms