RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Zfp606Q7TSV0 794 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Epha10Q8BYG9 1007 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Trub1Q8C0D0 338 aaKnown RBP11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Trps1Q925H1 1281 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Marc1Q9CW42 340 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 P2yr13Q9D8I2 337 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Chst7Q9EP78 484 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ilf3Q9Z1X4 898 aaKnown RBP11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Myo5bP21271 1818 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Faap100A2ACJ2 879 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm9493F6SVV1 192 aaKnown RBP11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mettl6Q8BVH9 282 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Clptm1lQ8BXA5 539 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 ItpkaQ8R071 459 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Atg13Q91YI1 516 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 D10Wsu102eQ9CX66 185 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Anks3Q9CZK6 655 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 AgkQ9ESW4 421 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Vmn2r19G5E8G4 854 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ninj1O70131 152 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Lrrc55Q3UY51 311 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Taar7dQ5QD10 358 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Spag1Q80ZX8 901 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Spata2lQ8BNN1 426 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ccser1Q8C0C4 895 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Nck1Q99M51 377 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Asb11Q9CQ31 323 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mbd1Q9Z2E2 636 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Flvcr1B2RXV4 560 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Per3O70361 1113 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 StimateQ3UF25 288 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Snx31Q6P8Y7 439 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Micu1Q8VCX5 477 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Olfr690Q8VH18 315 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Csde1Q91W50 798 aaKnown RBP11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Commd4Q9CQ02 199 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Trpv4Q9EPK8 871 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 LipaQ9Z0M5 397 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Col14a1Q80X19 1797 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Abca17E9PX95 1733 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 4930595D18RikD3Z642 64 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slc22a8O88909 537 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Stat5aP42230 793 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Btbd1P58544 488 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Perm1Q149B8 807 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zfp935Q14DI0 353 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Qsox2Q3TMX7 692 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Q3U4G0 281 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Taar7fQ5QD08 358 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Taar7eQ5QD09 358 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Taar7bQ5QD11 358 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mkrn3Q60764 544 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rasal3Q8C2K5 1041 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cyp51a1Q8K0C4 503 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Klhl1Q9JI74 751 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Elf4Q9Z2U4 655 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 NhsB1AV60 1647 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gucy2dA0A0U1RPR8 1117 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Sh3pxd2bA2AAY5 908 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 PotegA5H0M4 473 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Spata13Q5DU57 656 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slc20a1Q61609 681 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Olfr699Q7TRN3 316 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Pp2d1Q8BVT6 620 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Sirt2Q8VDQ8 389 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 DdoQ922Z0 341 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Txndc17Q9CQM5 123 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Arfgap1Q9EPJ9 414 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm5114W4VSN8 858 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Fam181aJ3QNB7 292 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Scamp3O35609 349 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rps6ka3P18654 740 aaKnown RBP11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tgfb2P27090 414 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Hsd17b2P51658 381 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Map3k3Q61084 626 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Dsg4Q7TMD7 1041 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Txndc5Q91W90 417 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 KlbQ99N32 1043 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 CtsmQ9JL96 333 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 9330159F19RikD3Z623 648 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Pax3P24610 479 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tulp2P46686 562 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mpp1P70290 466 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Pih1d3Q3KNI6 218 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Usp30Q3UN04 517 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gpalpp1Q69ZC8 346 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rnf220Q6PDX6 566 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Trappc6aQ78XR0 159 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ttc29Q80VM3 471 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Angptl8Q8R1L8 198 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Pex16Q91XC9 336 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zfp810Q99K45 461 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gkn2Q9CQS6 184 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Satl1Q9D5N8 744 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Fabp12Q9DAK4 132 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Hsd17b11Q9EQ06 298 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 SqleP52019 572 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Them4Q3UUI3 230 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Smarcd3Q6P9Z1 483 aa11.84□□□□□ -0.51
Trim56-201ENSMUST00000054384 Wscd1Q80XH4 572 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms