Protein–RNA interactions for Protein: Q8BXA5

Clptm1l, Cleft lip and palate transmembrane protein 1-like protein, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1lQ8BXA5 Gm25239-201ENSMUST00000174915 86 ntBASIC35.21■■■■□ 3.23
Clptm1lQ8BXA5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Clptm1lQ8BXA5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Clptm1lQ8BXA5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
Clptm1lQ8BXA5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Clptm1lQ8BXA5 Psd-208ENSMUST00000224556 2034 ntBASIC32.14■■■□□ 2.74
Clptm1lQ8BXA5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Clptm1lQ8BXA5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Clptm1lQ8BXA5 Gm15042-201ENSMUST00000120212 883 ntBASIC31.52■■■□□ 2.64
Clptm1lQ8BXA5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Clptm1lQ8BXA5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Clptm1lQ8BXA5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Clptm1lQ8BXA5 Gm15045-201ENSMUST00000117359 883 ntBASIC30.98■■■□□ 2.55
Clptm1lQ8BXA5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.95■■■□□ 2.55
Clptm1lQ8BXA5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Clptm1lQ8BXA5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Clptm1lQ8BXA5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Clptm1lQ8BXA5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Clptm1lQ8BXA5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Clptm1lQ8BXA5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Clptm1lQ8BXA5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Clptm1lQ8BXA5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Clptm1lQ8BXA5 Gm24109-201ENSMUST00000175489 103 ntBASIC30.17■■■□□ 2.42
Clptm1lQ8BXA5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Clptm1lQ8BXA5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Clptm1lQ8BXA5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Clptm1lQ8BXA5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.06■■■□□ 2.4
Clptm1lQ8BXA5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Clptm1lQ8BXA5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Clptm1lQ8BXA5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.85■■■□□ 2.37
Clptm1lQ8BXA5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Clptm1lQ8BXA5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Clptm1lQ8BXA5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Clptm1lQ8BXA5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Clptm1lQ8BXA5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Clptm1lQ8BXA5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Clptm1lQ8BXA5 Gm23366-201ENSMUST00000175022 89 ntBASIC29.51■■■□□ 2.31
Clptm1lQ8BXA5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Clptm1lQ8BXA5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.46■■■□□ 2.31
Clptm1lQ8BXA5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Clptm1lQ8BXA5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Clptm1lQ8BXA5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.32■■■□□ 2.28
Clptm1lQ8BXA5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Clptm1lQ8BXA5 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.28■■■□□ 2.28
Clptm1lQ8BXA5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Clptm1lQ8BXA5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Clptm1lQ8BXA5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Clptm1lQ8BXA5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Clptm1lQ8BXA5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.97■■■□□ 2.23
Clptm1lQ8BXA5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
Clptm1lQ8BXA5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Clptm1lQ8BXA5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.75■■■□□ 2.19
Clptm1lQ8BXA5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Clptm1lQ8BXA5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Clptm1lQ8BXA5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Clptm1lQ8BXA5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.53■■■□□ 2.16
Clptm1lQ8BXA5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Clptm1lQ8BXA5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Clptm1lQ8BXA5 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.44■■■□□ 2.14
Clptm1lQ8BXA5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Clptm1lQ8BXA5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Clptm1lQ8BXA5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Clptm1lQ8BXA5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Clptm1lQ8BXA5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Clptm1lQ8BXA5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Clptm1lQ8BXA5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Clptm1lQ8BXA5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Clptm1lQ8BXA5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Clptm1lQ8BXA5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Clptm1lQ8BXA5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Clptm1lQ8BXA5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.19■■■□□ 2.1
Clptm1lQ8BXA5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Clptm1lQ8BXA5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Clptm1lQ8BXA5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Clptm1lQ8BXA5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Clptm1lQ8BXA5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.92■■■□□ 2.06
Clptm1lQ8BXA5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Clptm1lQ8BXA5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Clptm1lQ8BXA5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.82■■■□□ 2.04
Clptm1lQ8BXA5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Clptm1lQ8BXA5 Gm27325-201ENSMUST00000175467 74 ntBASIC27.79■■■□□ 2.04
Clptm1lQ8BXA5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Clptm1lQ8BXA5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Clptm1lQ8BXA5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Clptm1lQ8BXA5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Clptm1lQ8BXA5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Clptm1lQ8BXA5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Clptm1lQ8BXA5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Clptm1lQ8BXA5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Clptm1lQ8BXA5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Clptm1lQ8BXA5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Clptm1lQ8BXA5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Clptm1lQ8BXA5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Clptm1lQ8BXA5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Clptm1lQ8BXA5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Clptm1lQ8BXA5 Gm25238-201ENSMUST00000174914 89 ntBASIC27.56■■■□□ 2
Clptm1lQ8BXA5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.56■■■□□ 2
Clptm1lQ8BXA5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Clptm1lQ8BXA5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.44■■□□□ 1.98
Clptm1lQ8BXA5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms