RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TP53BP1Q12888 1972 aaPredicted RBP23.87■■□□□ 1.41
PVT1-212ENST00000521951 MUC6Q6W4X9 2439 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 A0A1B0GVT2 93 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 UBA6A0AVT1 1052 aaPredicted RBP23.86■■□□□ 1.41
PVT1-212ENST00000521951 TNFRSF10CO14798 259 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 FUCA1P04066 466 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 C21orf59P57076 290 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 NXPH1P58417 271 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 NAB1Q13506 487 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 KCTD16Q68DU8 428 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 CNSTQ6PJW8 725 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 DET1Q7L5Y6 550 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 RABEPKQ7Z6M1 372 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 STRA8Q7Z7C7 330 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 LRRC6Q86X45 466 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 CLDN19Q8N6F1 224 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 CEP76Q8TAP6 659 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 SGF29Q96ES7 293 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 ARRDC1-AS1Q9H2J1 176 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 MRPL40Q9NQ50 206 aaKnown RBP23.86■■□□□ 1.41
PVT1-212ENST00000521951 PNMA8BQ9ULN7 279 aaPredicted RBP23.86■■□□□ 1.41
PVT1-212ENST00000521951 ANKRD6Q9Y2G4 727 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 PCDHGA5Q9Y5G8 931 aa23.86■■□□□ 1.41
PVT1-212ENST00000521951 USP34Q70CQ2 3546 aa23.85■■□□□ 1.41
PVT1-212ENST00000521951 PRMT5O14744 637 aaPredicted RBP23.85■■□□□ 1.41
PVT1-212ENST00000521951 NUAK1O60285 661 aa23.85■■□□□ 1.41
PVT1-212ENST00000521951 GTF2H3Q13889 308 aa23.85■■□□□ 1.41
PVT1-212ENST00000521951 KLHL38Q2WGJ6 581 aa23.85■■□□□ 1.41
PVT1-212ENST00000521951 OR1E3Q8WZA6 343 aa23.85■■□□□ 1.41
PVT1-212ENST00000521951 MRRFQ96E11 262 aaKnown RBP23.85■■□□□ 1.41
PVT1-212ENST00000521951 SCARF2Q96GP6 870 aaPredicted RBP23.85■■□□□ 1.41
PVT1-212ENST00000521951 CLPBQ9H078 707 aa23.85■■□□□ 1.41
PVT1-212ENST00000521951 P2RY12Q9H244 342 aa23.85■■□□□ 1.41
PVT1-212ENST00000521951 KLQ9UEF7 1012 aa23.85■■□□□ 1.41
PVT1-212ENST00000521951 MOSPD1Q9UJG1 213 aa23.85■■□□□ 1.41
PVT1-212ENST00000521951 CHUKO15111 745 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 SGTAO43765 313 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 DNAJC6O75061 913 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 H2AFXP16104 143 aaPredicted RBP23.84■■□□□ 1.41
PVT1-212ENST00000521951 FMO4P31512 558 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 NBL1P41271 181 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 ABCG1P45844 678 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 CTSCP53634 463 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 BNC1Q01954 994 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 EIF2B5Q13144 721 aaKnown RBP23.84■■□□□ 1.41
PVT1-212ENST00000521951 TMEM220Q6QAJ8 160 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 TSACCQ96A04 125 aaPredicted RBP23.84■■□□□ 1.41
PVT1-212ENST00000521951 CPNE1Q99829 537 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 PCYT1BQ9Y5K3 369 aaPredicted RBP23.84■■□□□ 1.41
PVT1-212ENST00000521951 LRP4O75096 1905 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 GPR179Q6PRD1 2367 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 EXOC1LA0A1B0GW35 172 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 PRSS38A1L453 326 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 OR2AG2A6NM03 316 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 PATE3B3GLJ2 98 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 GPR89AB7ZAQ6 455 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 FAM155BO75949 473 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 SHBGP04278 402 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 CFIP05156 583 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 IVLP07476 585 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 GPR89BP0CG08 455 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 RPS3P23396 243 aaKnown RBP eCLIP23.84■■□□□ 1.41
PVT1-212ENST00000521951 MPLP40238 635 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 CD151P48509 253 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 ADARP55265 1226 aaKnown RBP23.84■■□□□ 1.41
PVT1-212ENST00000521951 EIF3BP55884 814 aaKnown RBP23.84■■□□□ 1.41
PVT1-212ENST00000521951 SRP54P61011 504 aaKnown RBP23.84■■□□□ 1.41
PVT1-212ENST00000521951 ALG11Q2TAA5 492 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 PDXPQ96GD0 296 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 BIRC8Q96P09 236 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 MCMBPQ9BTE3 642 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 RMI1Q9H9A7 625 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 CYP4F12Q9HCS2 524 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 ARGLU1Q9NWB6 273 aaPredicted RBP23.84■■□□□ 1.41
PVT1-212ENST00000521951 TXNDC16Q9P2K2 825 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 SUFUQ9UMX1 484 aa23.84■■□□□ 1.41
PVT1-212ENST00000521951 VPS13AQ96RL7 3174 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 RALGAPA1Q6GYQ0 2036 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 POC1B-GALNT4F8VUJ3 575 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 AP2A2O94973 939 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 GP5P40197 560 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 CTSKP43235 329 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 CSE1LP55060 971 aaKnown RBP23.83■■□□□ 1.41
PVT1-212ENST00000521951 KIF19Q2TAC6 998 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 SLC23A3Q6PIS1 610 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 RD3Q7Z3Z2 195 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 PARGQ86W56 976 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 SLC44A1Q8WWI5 657 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 CCDC77Q9BR77 488 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 CAPN10Q9HC96 672 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 ZNHIT2Q9UHR6 403 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 SLC6A14Q9UN76 642 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 PRKAB1Q9Y478 270 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 SNX11Q9Y5W9 270 aa23.83■■□□□ 1.41
PVT1-212ENST00000521951 TDRD6O60522 2096 aaKnown RBP23.83■■□□□ 1.4
PVT1-212ENST00000521951 GRID2O43424 1007 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 RETP07949 1114 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 PPARDQ03181 441 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 CCDC6Q16204 474 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 ZNF542PQ5EBM4 170 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms