RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PARGQ86W56 976 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 PROSER1Q86XN7 944 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 PAF1Q8N7H5 531 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 NIPA2Q8N8Q9 360 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 DENND6BQ8NEG7 585 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 OR4C6Q8NH72 309 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 MDM1Q8TC05 714 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 CSPG4P5Q96PW8 444 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 TUBGCP5Q96RT8 1024 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 SLC38A3Q99624 504 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 C1QTNF7Q9BXJ2 289 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 MBNL1Q9NR56 388 aaKnown RBP8.12□□□□□ -1.11
RIF1-211ENST00000494333 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.12□□□□□ -1.11
RIF1-211ENST00000494333 ETNK2Q9NVF9 386 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 TMA7Q9Y2S6 64 aaKnown RBP8.12□□□□□ -1.11
RIF1-211ENST00000494333 COQ6Q9Y2Z9 468 aa8.12□□□□□ -1.11
RIF1-211ENST00000494333 TSPAN11A1L157 253 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 HGSO14964 777 aaPredicted RBP8.11□□□□□ -1.11
RIF1-211ENST00000494333 SCAMP1O15126 338 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 MUSKO15146 869 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 NEBLO76041 1014 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 PRKCGP05129 697 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 TMEM253P0C7T8 217 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 ALPPL2P10696 532 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 MYF5P13349 255 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 ACP1P24666 158 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 SERPINA4P29622 427 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 HNRNPH3P31942 346 aaKnown RBP8.11□□□□□ -1.11
RIF1-211ENST00000494333 HNF1BP35680 557 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 IGFALSP35858 605 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 RENBPP51606 427 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 CDH6P55285 790 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 YPEL5P62699 121 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 POLR2LP62875 67 aaKnown RBP8.11□□□□□ -1.11
RIF1-211ENST00000494333 SLC25A11Q02978 314 aaKnown RBP8.11□□□□□ -1.11
RIF1-211ENST00000494333 EIF2B5Q13144 721 aaKnown RBP8.11□□□□□ -1.11
RIF1-211ENST00000494333 TARDBPQ13148 414 aaKnown RBP eCLIP8.11□□□□□ -1.112e-6■■□□□ 12
RIF1-211ENST00000494333 ILKQ13418 452 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 KRT81Q14533 505 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 RFTN1Q14699 578 aaPredicted RBP8.11□□□□□ -1.11
RIF1-211ENST00000494333 TCEA2Q15560 299 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 HADHQ16836 314 aaKnown RBP8.11□□□□□ -1.11
RIF1-211ENST00000494333 ATP13A4Q4VNC1 1196 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 EMC4Q5J8M3 183 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 ERAP2Q6P179 960 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 TP53I13Q8NBR0 393 aaPredicted RBP8.11□□□□□ -1.11
RIF1-211ENST00000494333 OR8K1Q8NGG5 319 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 TEKT4Q8WW24 435 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 ALG3Q92685 438 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 APOLD1Q96LR9 279 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 ZNF599Q96NL3 588 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 PSKH2Q96QS6 385 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 ATP13A3Q9H7F0 1226 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 PCDH18Q9HCL0 1135 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 PCDH12Q9NPG4 1184 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 NLGN3Q9NZ94 848 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 CTTNBP2NLQ9P2B4 639 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 TMEM131Q92545 1883 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 CHD8Q9HCK8 2581 aa8.11□□□□□ -1.11
RIF1-211ENST00000494333 EPG5Q9HCE0 2579 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 TCRBV16S1A1N1A0A5B0 115 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 A8MX80 341 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 K7ESM1 405 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 TRAFD1O14545 582 aaPredicted RBP8.1□□□□□ -1.11
RIF1-211ENST00000494333 AQP9O43315 295 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 MAFKO60675 156 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 PEX11BO96011 259 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 CD48P09326 243 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 H2AFZP0C0S5 128 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 MED14OSP0DP75 135 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 CKMT1AP12532 417 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 C6P13671 934 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 IL4RP24394 825 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 GJC1P36383 396 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 E2F1Q01094 437 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 C1orf61Q13536 156 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 ZNF235Q14590 738 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 IRF4Q15306 451 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 SLC18A3Q16572 532 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 C21orf62-AS1Q17RA5 79 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 WSCD2Q2TBF2 565 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 FAXCQ5TGI0 409 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 HES3Q5TGS1 186 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 SPECC1LQ69YQ0 1117 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 H2AFVQ71UI9 128 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 ZC3H7AQ8IWR0 971 aaKnown RBP8.1□□□□□ -1.11
RIF1-211ENST00000494333 BBS5Q8N3I7 341 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 KCTD6Q8NC69 237 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 ZNF548Q8NEK5 533 aaPredicted RBP8.1□□□□□ -1.11
RIF1-211ENST00000494333 ZNF564Q8TBZ8 553 aaPredicted RBP8.1□□□□□ -1.11
RIF1-211ENST00000494333 LMX1AQ8TE12 382 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 MZB1Q8WU39 189 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 PDCD6IPQ8WUM4 868 aaKnown RBP8.1□□□□□ -1.11
RIF1-211ENST00000494333 NSMCE1Q8WV22 266 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 CTNNBL1Q8WYA6 563 aaPredicted RBP8.1□□□□□ -1.11
RIF1-211ENST00000494333 ECHDC3Q96DC8 303 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 NSMCE3Q96MG7 304 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 IL12RB2Q99665 862 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 PACSIN1Q9BY11 444 aa8.1□□□□□ -1.11
RIF1-211ENST00000494333 SLC13A1Q9BZW2 595 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms